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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 17839 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 17839 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
5-HT Receptor
AChR
Antifungal
Adrenergic Receptor
Parasite
NF-κB
DNA/RNA Synthesis
COX
Dopamine Receptor
CDK
Calcium Channel
Potassium Channel
HIV Protease
Antioxidant
PI3K
EGFR
Cytochromes P450
Histamine Receptor
Dehydrogenase
Epigenetic Reader Domain
Sodium Channel
PDE
GABA Receptor
VEGFR
Reactive Oxygen Species
GluR
Histone Methyltransferase
TRP/TRPV Channel
PPAR
Microtubule Associated
Influenza Virus
HDAC
TNF
Wnt/beta-catenin
Phosphatase
JAK
Cholinesterase (ChE)
Topoisomerase
Akt
GPCR
mTOR
p38 MAPK
Prostaglandin Receptor
Antiviral
ERK
Estrogen/progestogen Receptor
SARS-CoV
Ferroptosis
Src
PKC
RAAS
NMDAR
HCV Protease
FLT
IL Receptor
Adenosine Receptor
PARP
Estrogen Receptor/ERR
STAT
Nucleoside Antimetabolite/Analog
iGluR
Opioid Receptor
Caspase
PDGFR
AMPK
FGFR
MMP
Glucocorticoid Receptor
NO Synthase
Virus Protease
Bcl-2 Family
GSK-3
Androgen Receptor
ROS
MAO
Raf
TLR
Lipoxygenase
HSP
c-Kit
Cannabinoid Receptor
ATPase
Bcr-Abl
ALK
c-Met/HGFR
Phospholipase
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Proteasome
Tyrosinase
TGF-beta/Smad
HBV
Mitochondrial Metabolism
Sirtuin
MAPK
Nrf2
Drug Metabolite
HSV
Ras
HIF/HIF Prolyl-Hydroxylase
Integrin
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Anti-infection
DUB
JNK
NOS
p53
Aurora Kinase
Mitophagy
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CCR
PKA
Transferase
ROCK
E1/E2/E3 Enzyme
Antifection
PROTACs
P-gp
MEK
Immunology/Inflammation related
HIF
Gamma-secretase
Carbonic Anhydrase
Casein Kinase
IκB/IKK
Monoamine Oxidase
Interleukin
Reverse Transcriptase
Cysteine Protease
S1P Receptor
Retinoid Receptor
Norepinephrine
RIP kinase
CXCR
Serotonin Transporter
Serine/threonin kinase
P2X Receptor
Reductase
Serine Protease
IGF-1R
Neurokinin receptor
Glucosidase
c-RET
LPL Receptor
FAK
NOD
Hedgehog/Smoothened
DNA-PK
TAM Receptor
Histone Acetyltransferase
Sigma receptor
FAAH
S6 Kinase
ATM/ATR
Glucokinase
Fatty Acid Synthase
PERK
CaMK
Trk receptor
HER
transporter
NADPH
Progesterone Receptor
c-Fms
ribosome
CFTR
Syk
Amino Acids and Derivatives
PLK
DPP-4
Proton pump
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HMG-CoA Reductase
Pim
DNA Methyltransferase
Acyltransferase
Endothelin Receptor
Mdm2
Thrombin
DNA
Protease-activated Receptor
Rho
Glucagon Receptor
Chk
cAMP
Kinesin
DHFR
Neuropeptide Y Receptor
Aryl Hydrocarbon Receptor
AhR
LTR
P2Y Receptor
FXR
Thyroid hormone receptor(THR)
Cholecystokinin Receptor
ROR
DNA Alkylator/Crosslinker
IRAK
Smo
PD-1/PD-L1
STING
Lipase
Leukotriene Receptor
LPA Receptor
Complement System
YAP
PDK
MRP
DYRK
SGLT
BACE
LRRK2
ADC Cytotoxin
Hydroxylase
BTK
Indoleamine 2,3-Dioxygenase (IDO)
Factor Xa
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Guanylate cyclase
OX Receptor
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c-Myc
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DNA Alkylation
Liver X Receptor
Epoxide Hydrolase
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Kras
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PAK
Ephrin Receptor
ROS Kinase
IRE1
Ligand for E3 Ligase
NOD-like Receptor (NLR)
PGE Synthase
GTPase
Antifolate
Myosin
PI4K
GHSR
Molecular Glues
LDL
Telomerase
CSF-1R
Melanocortin Receptor
ABC Transporter
Acetyl-CoA Carboxylase
Beta-Secretase
NADPH-oxidase
Monoamine Transporter
Bradykinin Receptor
GPCR19
GNRH Receptor
Neurotensin Receptor
Free radical scavengers
Aminopeptidase
Monocarboxylate transporter
MicroRNA
Lipid
PAI-1
Stearoyl-CoA Desaturase (SCD)
IDO
CaSR
Somatostatin
PAFR
Discoidin Domain Receptor (DDR)
Glutaminase
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MNK
PKM
Ligands for Target Protein for PROTAC
GRK
Phosphorylase
Isocitrate Dehydrogenase (IDH)
IFNAR
GPX
NAMPT
Imidazoline Receptor
Melatonin Receptor
BCRP
Neprilysin
OAT
UGT
MLK
LIM Kinase
Apelin receptor
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MT Receptor
Wee1
ATP Citrate Lyase
SGK
Na+/Ca2+ Exchanger
Angiotensin-converting Enzyme (ACE)
PTEN
AAK1
GST
Bombesin Receptor
Carboxypeptidase
APC/C
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Protease
OCT
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Amylase
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p97
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CD38
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VDAC
NPC1L1
Advanced Glycation End Products
Adiponectin Receptor
gp120/CD4
Thrombopoietin Receptor
Hck
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Liposome
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Haspin Kinase
Glutathione reductase
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Na-K-Cl cotransporter
GluCls
CPT
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KLF
FOXO1
Huntingtin
Glyoxalase
Glutaminyl Cyclase
Integrase
Taste receptor
PROTAC Linker
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RXFP receptor
E3 Ligase Ligand-Linker Conjugate
GSNOR
ATTECs
FKBP
Piezo Channel
Prolyl Endopeptidase (PREP)
Fas/FasL
NUDIX hydrolase
Transketolase
ADC Linker
hCE
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PGK1
OLIG2
N-Acetylglucosaminyltransferase
Thioredoxin
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stilbene oxidase
Motilin Receptor
glycosidase
Procollagen C Proteinase
Anion Exchanger
Endonuclease
Cuproptosis
Mucin
Neuropeptide W
REV-ERB
CYP19A1
MAP3K
NMU2R
Stemness kinase
Ferroportin
IGF-2R
PARG(Poly(ADP-ribose) Glycohydrolase)
Sodium-dependent phosphate transporter
PGC-1α
Poly(ADP-ribose) Glycohydrolase (PARG)