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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 17839 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 17839 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
5-HT Receptor
AChR
Antifungal
Adrenergic Receptor
Parasite
DNA/RNA Synthesis
NF-κB
COX
Dopamine Receptor
CDK
Calcium Channel
Potassium Channel
HIV Protease
Antioxidant
PI3K
EGFR
Histamine Receptor
Cytochromes P450
Dehydrogenase
Epigenetic Reader Domain
Sodium Channel
PDE
GABA Receptor
Reactive Oxygen Species
VEGFR
GluR
Histone Methyltransferase
TRP/TRPV Channel
Influenza Virus
Microtubule Associated
PPAR
HDAC
TNF
Wnt/beta-catenin
Cholinesterase (ChE)
Phosphatase
JAK
Akt
Topoisomerase
GPCR
mTOR
p38 MAPK
Prostaglandin Receptor
Estrogen/progestogen Receptor
SARS-CoV
Antiviral
ERK
Ferroptosis
Src
PKC
NMDAR
FLT
HCV Protease
IL Receptor
RAAS
Adenosine Receptor
Estrogen Receptor/ERR
PARP
STAT
Nucleoside Antimetabolite/Analog
iGluR
Caspase
PDGFR
AMPK
Opioid Receptor
FGFR
MMP
Glucocorticoid Receptor
NO Synthase
Virus Protease
Androgen Receptor
Bcl-2 Family
GSK-3
ROS
Raf
MAO
TLR
Lipoxygenase
c-Kit
HSP
Cannabinoid Receptor
ATPase
Bcr-Abl
ALK
Beta Amyloid
c-Met/HGFR
Phospholipase
HBV
Proteasome
TGF-beta/Smad
Tyrosinase
Mitochondrial Metabolism
Sirtuin
MAPK
Drug Metabolite
HSV
Nrf2
Anti-infection
HIF/HIF Prolyl-Hydroxylase
Ras
Histone Demethylase
DUB
Integrin
NOS
p53
Aurora Kinase
JNK
Antifection
Mitophagy
PKA
Tyrosine Kinases
CCR
E1/E2/E3 Enzyme
P-gp
PROTACs
ROCK
Transferase
MEK
Carbonic Anhydrase
Casein Kinase
Gamma-secretase
HIF
Immunology/Inflammation related
IκB/IKK
Monoamine Oxidase
Cysteine Protease
Reverse Transcriptase
Interleukin
Retinoid Receptor
S1P Receptor
Norepinephrine
CXCR
RIP kinase
Serotonin Transporter
P2X Receptor
Serine/threonin kinase
Reductase
Serine Protease
Glucosidase
IGF-1R
c-RET
Neurokinin receptor
FAK
LPL Receptor
DNA-PK
Hedgehog/Smoothened
NOD
Histone Acetyltransferase
TAM Receptor
Sigma receptor
ATM/ATR
CaMK
FAAH
Fatty Acid Synthase
Glucokinase
S6 Kinase
PERK
Trk receptor
HER
transporter
c-Fms
Chloride channel
HMG-CoA Reductase
NADPH
Progesterone Receptor
Proton pump
ribosome
Amino Acids and Derivatives
CFTR
DPP-4
PLK
Syk
Acyltransferase
Pim
DNA Methyltransferase
Endothelin Receptor
Mdm2
Thrombin
Chk
DNA
Glucagon Receptor
Protease-activated Receptor
cAMP
Kinesin
LTR
Rho
AhR
Aryl Hydrocarbon Receptor
DHFR
Neuropeptide Y Receptor
P2Y Receptor
Cholecystokinin Receptor
DNA Alkylator/Crosslinker
FXR
IRAK
PD-1/PD-L1
ROR
Smo
STING
Thyroid hormone receptor(THR)
Leukotriene Receptor
Lipase
LPA Receptor
ADC Cytotoxin
BACE
Complement System
Hydroxylase
LRRK2
MRP
PDK
SGLT
Xanthine Oxidase
YAP
BTK
DYRK
Factor Xa
Glutathione Peroxidase
Guanylate cyclase
Indoleamine 2,3-Dioxygenase (IDO)
OX Receptor
c-Myc
DNA Alkylation
Epoxide Hydrolase
Platelet aggregation
Vasopressin Receptor
Aromatase
Liver X Receptor
Kras
IAP
PAK
RSV
Ephrin Receptor
IRE1
Ligand for E3 Ligase
NOD-like Receptor (NLR)
PGE Synthase
ROS Kinase
Antifolate
GTPase
Myosin
ABC Transporter
CSF-1R
GHSR
LDL
Melanocortin Receptor
Molecular Glues
PI4K
Telomerase
Acetyl-CoA Carboxylase
Beta-Secretase
Bradykinin Receptor
GPCR19
Lipid
Monoamine Transporter
NADPH-oxidase
Aminopeptidase
Free radical scavengers
MicroRNA
Monocarboxylate transporter
PAI-1
Discoidin Domain Receptor (DDR)
DNA gyrase
Glutaminase
GNRH Receptor
IDO
Neurotensin Receptor
PAFR
Somatostatin
Stearoyl-CoA Desaturase (SCD)
Arrestin
CaSR
CETP
GPX
GRK
IFNAR
Isocitrate Dehydrogenase (IDH)
Ligands for Target Protein for PROTAC
MNK
NAMPT
Phosphorylase
PKM
BCRP
Imidazoline Receptor
Melatonin Receptor
MLK
Neprilysin
OAT
UGT
Angiotensin-converting Enzyme (ACE)
Arginase
ATP Citrate Lyase
LIM Kinase
MT Receptor
Porcupine
SGK
Wee1
AAK1
Adenylyl Cyclase
ASK
Carboxypeptidase
Dynamin
Gap Junction Protein
GlyT
GST
Na+/Ca2+ Exchanger
OCT
PAD
Protease
PTEN
SIK
Tie-2
Annexin A
APC/C
Apelin receptor
Bombesin Receptor
cGAS
CGRP Receptor
CRFR
MAGL
Melanin-concentrating Hormone Receptor (MCHR)
Methionine Adenosyltransferase (MAT)
MyD88
p97
PYK2
TSH Receptor
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Amylase
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FLAP
HCN Channel
MALT
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OXPHOS
Oxytocin Receptor
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TOPK
ACK1
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BMI-1
CD73
Cell Cycle Arrest
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MTH1
NEDD8
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Adiponectin Receptor
Advanced Glycation End Products
AIM2
CD38
FOXO3
Galectin
gp120/CD4
Hck
Hexokinase
NPC1L1
RANKL/RANK
Thrombopoietin Receptor
VDAC
Vitamin
CPT
FABP
GluCls
Glutathione reductase
Haspin Kinase
HuR
KLF
KSP
Liposome
Na-K-Cl cotransporter
Necroptosis
PSMA
Transaminase
ADC Linker
ATTECs
E3 Ligase Ligand-Linker Conjugate
EBI2/GPR183
Fas/FasL
FKBP
FOXO1
Glutaminyl Cyclase
Glyoxalase
GSNOR
hCE
Huntingtin
Integrase
Lysosomal Autophagy
NUDIX hydrolase
PACAP
Piezo Channel
Prolyl Endopeptidase (PREP)
PROTAC Linker
RXFP receptor
Taste receptor
Transketolase
VDA
OLIG2
PGK1
Aconitase
Anion Exchanger
Cuproptosis
CYP19A1
Endonuclease
Fer/FerT kinase
glycosidase
MAP3K
MDM-2/p53
Motilin Receptor
Mucin
N-Acetylglucosaminyltransferase
NEDD4-1
Neuropeptide W
NMU2R
Procollagen C Proteinase
REV-ERB
Stemness kinase
stilbene oxidase
Thioredoxin
Ferroportin
IGF-2R
PARG(Poly(ADP-ribose) Glycohydrolase)
PGC-1α
Sodium-dependent phosphate transporter
Poly(ADP-ribose) Glycohydrolase (PARG)