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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19170 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19170 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
Dopamine Receptor
PI3K
CDK
Cytochromes P450
HIV Protease
Akt
p38 MAPK
Ras
Caspase
Interleukin
Antioxidant
TNF
Dehydrogenase
Histamine Receptor
Sodium Channel
EGFR
ERK
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Influenza Virus
Cholinesterase (ChE)
Drug Metabolite
mTOR
Wnt/beta-catenin
Microtubule Associated
SARS-CoV
Phosphatase
TRP/TRPV Channel
GluR
STAT
Bcl-2 Family
Histone Methyltransferase
Nucleoside Antimetabolite/Analog
Ferroptosis
Prostaglandin Receptor
JAK
HDAC
Estrogen Receptor/ERR
GPCR
MMP
PARP
AMPK
Topoisomerase
Src
JNK
IL Receptor
Mitochondrial Metabolism
Nrf2
PKC
TLR
Anti-infection
HCV Protease
Opioid Receptor
Beta Amyloid
GSK-3
TGF-beta/Smad
Antiviral
Estrogen/progestogen Receptor
Adenosine Receptor
FLT
RAAS
NMDAR
PDGFR
Monoamine Oxidase
Androgen Receptor
Amino Acids and Derivatives
Glucocorticoid Receptor
MDM-2/p53
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Tyrosinase
HSP
FGFR
Lipoxygenase
Proteasome
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HSV
Raf
Phospholipase
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ATPase
HBV
c-Kit
MAO
ALK
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Serine Protease
Immunology/Inflammation related
Transferase
E1/E2/E3 Enzyme
P-gp
Reductase
Integrin
PKA
Histone Demethylase
DUB
PROTACs
Glucosidase
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LPL Receptor
PERK
glycosidase
NOD-like Receptor (NLR)
Mitophagy
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Serotonin Transporter
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IGF-1R
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P2X Receptor
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transporter
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CFTR
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c-Fms
DNA-PK
ATM/ATR
TAM Receptor
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DNA Methyltransferase
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ribosome
HER
P2Y Receptor
FXR
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Hydroxylase
ROS Kinase
Cholecystokinin Receptor
Lipid
STING
Complement System
IRAK
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Glucagon Receptor
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IFNAR
cAMP
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PDK
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LPA Receptor
BTK
Guanylate cyclase
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Platelet aggregation
MRP
Photosensitizer
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MAGL
Neuropeptide Y Receptor
OX Receptor
SGLT
LRRK2
Pyroptosis
RSV
PAK
Stearoyl-CoA Desaturase (SCD)
Acetyl-CoA Carboxylase
Ligands for Target Protein for PROTAC
BACE
GNRH Receptor
Glutaminase
Myosin
PAFR
Isocitrate Dehydrogenase (IDH)
Vasopressin Receptor
Epoxide Hydrolase
PAI-1
Arrestin
Monoamine Transporter
DNA Alkylation
Beta-Secretase
Aromatase
IRE1
Bradykinin Receptor
Survivin
Ephrin Receptor
GST
Liposome
GTPase
LDL
Telomerase
GPCR19
PI4K
Monocarboxylate transporter
Somatostatin
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ABC Transporter
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MyD88
LDLR
NR4A
BCRP
FOXO
MLK
IKZF
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Amylase
PTEN
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GHSR
Discoidin Domain Receptor (DDR)
NADPH-oxidase
PKM
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Tie-2
Cell Cycle Arrest
UGT
GRK
DNA gyrase
FKBP
GPX
Apelin receptor
Melatonin Receptor
Bcl-6
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Gap Junction Protein
Imidazoline Receptor
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Orphan Receptor
Wee1
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MT Receptor
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ASK
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p62
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E3 Ligase Ligand-Linker Conjugate
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Thrombopoietin Receptor
PSMA
TSH Receptor
Oxytocin Receptor
APC/C
MTP
CETP
TOPK
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AAK1
Neuropeptide FF Receptor
Na-K-Cl cotransporter
PROTAC Linker
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Adenosine Deaminase
REV-ERB
Taste receptor
NPC1L1
RAR/RXR
CD38
MALT
NEDD8
Succinate Receptor 1 (SUCNR1)
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Decarboxylase
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KLF
Cuproptosis
BMI-1
FOXO3
ASBT
DprE1
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Hck
MTH1
FABP
Haspin Kinase
Hexokinase
ACK1
CD73
AIM2
Advanced Glycation End Products
Ferroportin
gp120/CD4
Kisspeptin
Adiponectin Receptor
AAK1 (AP2 associated kinase 1)
Huntingtin
CPT
PGK1
Transaminase
GDNF
EBI2/GPR183
Factor VIIa
Endonuclease
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Mucin
Glutathione reductase
GluCls
HuR
NEDD4-1
Tight Junction Protein
Drug-Linker Conjugates for ADC
GSNOR
CYP19A1
Piezo Channel
NUDIX hydrolase
Y Box Binding Protein 1
Glutaminyl Cyclase
Aconitase
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Photosystem (PS)
Fas/FasL
PACAP
Integrase
Transketolase
GHR
Early 2 Factor (E2F)
Urea Transporter
CD74
hCE
TMV
RXFP receptor
ATTECs
Lysosomal Autophagy
Glyoxalase
OLIG2
stilbene oxidase
Procollagen C Proteinase
Neuropeptide W
LHRH
N-Acetylglucosaminyltransferase
B7
Stemness kinase
Transmembrane Glycoprotein
Motilin Receptor
Anion Exchanger
Thioredoxin
PGC-1α
FMO
Target Protein Ligand-Linker Conjugate
AUTACs
Sulfotransferase
Poly(ADP-ribose) Glycohydrolase (PARG)
MHC
Fer/FerT kinase
MAP3K
Enteropeptidase (EP)
Sodium-dependent phosphate transporter
NMU2R
IGF-2R
NMUR

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