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Cyanine 5 DBCO

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Catalog No. T212439Cas No. 3091879-39-6
Alias DBCO-Cy5, Cyanine5 dibenzocyclooctyne

Cyanine5 DBCO (DBCO-Cy5) is a low-toxicity azide-reactive probe (near-infrared fluorescent dye) designed for imaging azide-labeled biomolecules via copper-free "click chemistry" [Ex=635 nm, Em=650-700 nm]. It exhibits no significant cytotoxicity in cells or animals and does not impact the physiological functions of non-target cells. Cyanine5 DBCO is suitable for labeling and tracking cells both in vivo and in vitro.

Cyanine 5 DBCO

Cyanine 5 DBCO

😃Good
Catalog No. T212439Alias DBCO-Cy5, Cyanine5 dibenzocyclooctyneCas No. 3091879-39-6
Cyanine5 DBCO (DBCO-Cy5) is a low-toxicity azide-reactive probe (near-infrared fluorescent dye) designed for imaging azide-labeled biomolecules via copper-free "click chemistry" [Ex=635 nm, Em=650-700 nm]. It exhibits no significant cytotoxicity in cells or animals and does not impact the physiological functions of non-target cells. Cyanine5 DBCO is suitable for labeling and tracking cells both in vivo and in vitro.
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All TargetMol products are for research purposes only and cannot be used for human consumption. We do not provide products or services to individuals. Please comply with the intended use and do not use TargetMol products for any other purpose.
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Product Introduction

Bioactivity
Description
Cyanine5 DBCO (DBCO-Cy5) is a low-toxicity azide-reactive probe (near-infrared fluorescent dye) designed for imaging azide-labeled biomolecules via copper-free "click chemistry" [Ex=635 nm, Em=650-700 nm]. It exhibits no significant cytotoxicity in cells or animals and does not impact the physiological functions of non-target cells. Cyanine5 DBCO is suitable for labeling and tracking cells both in vivo and in vitro.
In vitro
Guide (The following is our recommended solution. This solution is merely a guideline and should be modified according to your specific needs.): For solution preparation, 1) Stock Solution: Use DMSO as the solvent with a recommended concentration of 20 mM. Store in aliquots at -20°C or -80°C, shielded from light, and avoid repeated freeze-thaw cycles. 2) Working Solution: Dilute with PBS or serum-free medium to 20 μM (optimize for specific experiments), and use immediately while protecting from light. For cell labeling (e.g., A549 cells), 3) Seed 2 mL of growing cells at a density of 3×10^4 (cell-dependent) in a 35 mm glass-bottom culture dish. 4) Add Ac4ManNAz (50 μM, final concentration) and incubate for 3 days to produce azide groups on the cell surface. 5) Wash cells twice with DPBS (pH 7.4). 6) Incubate cells with Cyanine5 DBCO (20 μM, final concentration) at 37°C for 1 hour. 7) Rinse with DPBS (pH 7.4) and fix with a formaldehyde-glutaraldehyde solution at 25°C for 15 minutes. 8) Wash cells twice with DPBS (pH 7.4) and stain with DAPI to label nuclei. 9) Measure Cyanine5 DBCO fluorescence using a confocal laser scanning microscope (Ex=635 nm, Em=650-700 nm). Note: 1) After Ac4ManNAz treatment, Cyanine5 DBCO can target azide groups introduced on the cell surface for over 3 days. 2) Cyanine5 DBCO labeling is dose-dependent.

The above information is based on published literature. Experimental procedures should be appropriately modified to meet specific research demands.
SynonymsDBCO-Cy5, Cyanine5 dibenzocyclooctyne
Chemical Properties
Molecular Weight819.51
FormulaC53H59ClN4O2
Cas No.3091879-39-6
Smiles[Cl-].O=C(NCCCCCC(=O)N1C=2C=CC=CC2C#CC=3C=CC=CC3C1)CCCCCN4C=5C=CC=CC5C(C4=CC=CC=CC6=[N+](C=7C=CC=CC7C6(C)C)C)(C)C
Storage & Solubility Information
Storagekeep away from direct sunlight | Powder: -20°C for 3 years | In solvent: -80°C for 1 year | Shipping with blue ice/Shipping at ambient temperature.

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In Vivo Formulation Calculator (Clear solution)

Please enter your animal experiment information in the following box and click Calculate to obtain the stock solution preparation method and in vivo formula preparation method:
TargetMol | Animal experiments For example, if the intended dosage is 10 mg/kg for animals weighing 20 g , with a dosing volume of 100 μL per animal, TargetMol | Animal experiments and a total of 10 animals are to be administered, using a formulation of TargetMol | reagent 10% DMSO+ 40% PEG300+ 5% Tween 80+ 45% Saline/PBS/ddH2O , the resulting working solution concentration would be 2 mg/mL.
Stock Solution Preparation:

Dissolve 2 mg of the compound in 100 μL DMSOTargetMol | reagent to obtain a stock solution at a concentration of 20 mg/mL . If the required concentration exceeds the compound's known solubility, please contact us for technical support before proceeding.

Preparation of the In Vivo Formulation:

1) Add 100 μL of the DMSOTargetMol | reagent stock solution to 400 μL PEG300TargetMol | reagent and mix thoroughly until the solution becomes clear.

2) Add 50 μL Tween 80 and mix well until fully clarified.

3) Add 450 μL Saline,PBS or ddH2OTargetMol | reagent and mix thoroughly until a homogeneous solution is obtained.

This example is provided solely to demonstrate the use of the In Vivo Formulation Calculator and does not constitute a recommended formulation for any specific compound. Please select an appropriate dissolution and formulation strategy based on your experimental model and route of administration.
All co-solvents required for this protocol, includingDMSO, PEG300/PEG400, Tween 80, SBE-β-CD, and Corn oil, are available for purchase on the TargetMol website.
1 Enter information below:
mg/kg
g
μL
2 Enter the in vivo formulation:
% DMSO
%
% Tween 80
% Saline/PBS/ddH2O

Dose Conversion

You can also refer to dose conversion for different animals. More Dose Conversion

Tech Support

Please see Inhibitor Handling Instructions for more frequently ask questions. Topics include: how to prepare stock solutions, how to store products, and cautions on cell-based assays & animal experiments, etc
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