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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19170 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19170 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
Dopamine Receptor
PI3K
CDK
Cytochromes P450
Akt
HIV Protease
p38 MAPK
Ras
Caspase
Interleukin
Antioxidant
TNF
Dehydrogenase
ERK
Histamine Receptor
Sodium Channel
EGFR
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Influenza Virus
Cholinesterase (ChE)
Drug Metabolite
mTOR
Wnt/beta-catenin
Microtubule Associated
Phosphatase
SARS-CoV
GluR
TRP/TRPV Channel
STAT
Bcl-2 Family
Histone Methyltransferase
Nucleoside Antimetabolite/Analog
Ferroptosis
Prostaglandin Receptor
HDAC
Estrogen Receptor/ERR
JAK
MMP
GPCR
PARP
Topoisomerase
AMPK
Src
IL Receptor
JNK
Mitochondrial Metabolism
Nrf2
PKC
HCV Protease
TLR
Beta Amyloid
Opioid Receptor
Anti-infection
Estrogen/progestogen Receptor
TGF-beta/Smad
Antiviral
GSK-3
FLT
Adenosine Receptor
RAAS
NMDAR
PDGFR
Androgen Receptor
Amino Acids and Derivatives
Monoamine Oxidase
Glucocorticoid Receptor
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
Tyrosinase
FGFR
HSP
MAPK
Lipoxygenase
Proteasome
HSV
Raf
Phospholipase
c-Met/HGFR
HBV
ATPase
c-Kit
MAO
ALK
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Immunology/Inflammation related
Bcr-Abl
Serine Protease
P-gp
Transferase
E1/E2/E3 Enzyme
Reductase
PKA
Integrin
Histone Demethylase
PROTACs
DUB
Glucosidase
KRas
LPL Receptor
glycosidase
NOD-like Receptor (NLR)
Casein Kinase
Mitophagy
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IGF-1R
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CXCR
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HIF
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CaMK
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S1P Receptor
RIP kinase
Proton pump
P2X Receptor
Fatty Acid Synthase
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Acyltransferase
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NOD
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Trk receptor
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transporter
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ATM/ATR
TAM Receptor
PD-1/PD-L1
DNA-PK
Progesterone Receptor
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Glucokinase
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DNA Methyltransferase
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HER
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ribosome
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P2Y Receptor
DPP-4
Hydroxylase
ROS Kinase
STING
Lipid
Complement System
IRAK
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Glucagon Receptor
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DHFR
Cholecystokinin Receptor
Mdm2
DNA
IFNAR
PDK
Protease-activated Receptor
Liver X Receptor
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OXPHOS
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LPA Receptor
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BTK
Guanylate cyclase
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MAGL
LRRK2
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IAP
Neuropeptide Y Receptor
SGLT
RSV
MRP
OX Receptor
Photosensitizer
Acetyl-CoA Carboxylase
Stearoyl-CoA Desaturase (SCD)
PAK
Epoxide Hydrolase
Ligands for Target Protein for PROTAC
PAFR
Glutaminase
GNRH Receptor
Isocitrate Dehydrogenase (IDH)
Vasopressin Receptor
PAI-1
Arrestin
Monoamine Transporter
BACE
Myosin
DNA Alkylation
Beta-Secretase
Aromatase
IRE1
Bradykinin Receptor
Survivin
Liposome
Ephrin Receptor
Telomerase
GPCR19
PI4K
GTPase
Monocarboxylate transporter
LDL
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ABC Transporter
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CSF-1R
CaSR
MyD88
NR4A
MLK
BCRP
LDLR
FOXO
IKZF
Amylase
PTEN
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NADPH-oxidase
PKM
Discoidin Domain Receptor (DDR)
NAMPT
GHSR
Melatonin Receptor
DNA gyrase
FKBP
GPX
GRK
Dynamin
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UGT
Tie-2
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Apelin receptor
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Imidazoline Receptor
CRFR
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Protease
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Wee1
ASK
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p62
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MT Receptor
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LIM Kinase
Orphan Receptor
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p97
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SIK
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Thrombopoietin Receptor
E3 Ligase Ligand-Linker Conjugate
APC/C
CAT
HCN Channel
Oxytocin Receptor
MTP
MRGPR
CETP
Na-K-Cl cotransporter
Galectin
TOPK
AAK1
Neuropeptide FF Receptor
Adenosine Deaminase
REV-ERB
RAR/RXR
MALT
CD38
NEDD8
PROTAC Linker
Hippo pathway
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KLF
BMI-1
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Succinate Receptor 1 (SUCNR1)
Decarboxylase
ASCT
MELK
FOXO3
DprE1
FABP
VDAC
CD73
Cell wall
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ACK1
MTH1
Haspin Kinase
Hexokinase
ASBT
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Huntingtin
Adiponectin Receptor
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AAK1 (AP2 associated kinase 1)
PGK1
Kisspeptin
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gp120/CD4
CPT
KSP
GluCls
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Factor VIIa
Endonuclease
HuR
NEDD4-1
Tight Junction Protein
Transaminase
Mucin
Glutathione reductase
EBI2/GPR183
Drug-Linker Conjugates for ADC
PACAP
RXFP receptor
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Photosystem (PS)
Transketolase
CD74
NUDIX hydrolase
Piezo Channel
Fas/FasL
Early 2 Factor (E2F)
hCE
TMV
CYP19A1
ATTECs
Glyoxalase
Glutaminyl Cyclase
Urea Transporter
Aconitase
Integrase
GSNOR
Y Box Binding Protein 1
GHR
Lysosomal Autophagy
OLIG2
Neuropeptide W
PGC-1α
Sulfotransferase
stilbene oxidase
N-Acetylglucosaminyltransferase
Anion Exchanger
FMO
Procollagen C Proteinase
Stemness kinase
Poly(ADP-ribose) Glycohydrolase (PARG)
B7
Transmembrane Glycoprotein
Target Protein Ligand-Linker Conjugate
AUTACs
Fer/FerT kinase
MAP3K
Motilin Receptor
Thioredoxin
LHRH
MHC
Enteropeptidase (EP)
Sodium-dependent phosphate transporter
NMU2R
IGF-2R
NMUR

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