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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19730 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

size

  • 1 mg
  • 10 µL x 10 mM (in DMSO)
  • 30 µL x 10 mM (in DMSO)
  • 50 µL x 10 mM (in DMSO)
  • 100 µL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19730 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Potassium Channel
Reactive Oxygen Species
PI3K
Dopamine Receptor
CDK
Cytochromes P450
Akt
HIV Protease
Antioxidant
p38 MAPK
Ras
Interleukin
TNF
Caspase
Dehydrogenase
Histamine Receptor
Sodium Channel
ERK
GABA Receptor
EGFR
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
Cholinesterase (ChE)
iGluR
Drug Metabolite
Influenza Virus
Wnt/beta-catenin
mTOR
Microtubule Associated
Phosphatase
TRP/TRPV Channel
SARS-CoV
Histone Methyltransferase
STAT
GluR
Nucleoside Antimetabolite/Analog
Bcl-2 Family
Prostaglandin Receptor
JAK
Ferroptosis
GPCR
HDAC
Estrogen Receptor/ERR
MMP
Topoisomerase
PARP
AMPK
IL Receptor
Src
Mitochondrial Metabolism
JNK
PKC
Nrf2
Beta Amyloid
Anti-infection
HCV Protease
TLR
Antiviral
GSK-3
Adenosine Receptor
FLT
Estrogen/progestogen Receptor
Opioid Receptor
TGF-beta/Smad
RAAS
NMDAR
PDGFR
Androgen Receptor
Monoamine Oxidase
Glucocorticoid Receptor
Amino Acids and Derivatives
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
Tyrosinase
HSP
FGFR
Lipoxygenase
MAPK
HSV
Phospholipase
Raf
c-Met/HGFR
ATPase
MAO
HBV
Immunology/Inflammation related
Serine Protease
c-Kit
Bcr-Abl
ALK
Cannabinoid Receptor
E1/E2/E3 Enzyme
PROTACs
P-gp
Sirtuin
Reductase
Transferase
Integrin
BTK
PKA
Histone Demethylase
DUB
Glucosidase
Kras
glycosidase
NOD-like Receptor (NLR)
LPL Receptor
Antifection
Casein Kinase
Carbonic Anhydrase
Aurora Kinase
CCR
MEK
Mitophagy
Serotonin Transporter
NOS
IGF-1R
IκB/IKK
PERK
ROCK
Gamma-secretase
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p53
CXCR
Reverse Transcriptase
Angiotensin-converting Enzyme (ACE)
Cysteine Protease
Neurokinin receptor
Serine/threonin kinase
Retinoid Receptor
CaMK
HIF
Histone Acetyltransferase
FAK
RIP kinase
P2X Receptor
Proton pump
Sigma receptor
Leukotriene Receptor
Acyltransferase
Norepinephrine
S1P Receptor
Aryl Hydrocarbon Receptor
NOD
Fatty Acid Synthase
Hedgehog/Smoothened
Trk receptor
CFTR
NADPH
transporter
Molecular Glues
Chloride channel
Glutathione Peroxidase
c-RET
S6 Kinase
Proteasome
ATM/ATR
PD-1/PD-L1
c-Fms
TAM Receptor
DPP-4
Ligands for E3 Ligase
Thrombin
DNA-PK
Progesterone Receptor
FAAH
HMG-CoA Reductase
Lipase
Glucokinase
Kinesin
Xanthine Oxidase
PLK
DNA Alkylator/Crosslinker
YAP
Syk
Thyroid hormone receptor(THR)
Chk
DNA Methyltransferase
Cholecystokinin Receptor
Smo
Lipid
ribosome
IRAK
HER
P2Y Receptor
c-Myc
IDO
Pim
Glucagon Receptor
STING
AXL
DHFR
Mdm2
Liver X Receptor
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DNA
Indoleamine 2,3-Dioxygenase (IDO)
Complement System
ROS Kinase
LTR
PDK
Protease-activated Receptor
Hydroxylase
DYRK
IFNAR
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AhR
ROR
cAMP
OXPHOS
PGE Synthase
Melanocortin Receptor
ADC Cytotoxin
Neuropeptide Y Receptor
Endothelin Receptor
Factor Xa
OX Receptor
Aminopeptidase
LPA Receptor
Platelet aggregation
GNRH Receptor
Guanylate cyclase
E3 Ligase Ligand-Linker Conjugates
Pyroptosis
RSV
Necroptosis
IAP
MRP
Vasopressin Receptor
LRRK2
MAGL
SGLT
PAFR
Stearoyl-CoA Desaturase (SCD)
PAK
Epoxide Hydrolase
PAI-1
BACE
Ligands for Target Protein for PROTAC
Photosensitizer
Myosin
Bradykinin Receptor
Isocitrate Dehydrogenase (IDH)
Acetyl-CoA Carboxylase
Glutaminase
DNA Alkylation
Beta-Secretase
PI4K
Arrestin
IRE1
ABC Transporter
Monoamine Transporter
Telomerase
Ephrin Receptor
Aromatase
GTPase
Cell Cycle Arrest
PKM
Liposome
FOXO
Monocarboxylate transporter
MicroRNA
LDL
Phosphorylase
ATG
Neurotensin Receptor
Somatostatin
Free radical scavengers
GPCR19
GST
MyD88
LDLR
CSF-1R
Adenylate cyclase
Survivin
Melatonin Receptor
CaSR
NR4A
PROTAC Linker
PTEN
OAT
MLK
GPX
IKZF
Amylase
DNA gyrase
NAMPT
BCRP
Protease
GHSR
Discoidin Domain Receptor (DDR)
NADPH-oxidase
Dynamin
Tie-2
GRK
FKBP
Gap Junction Protein
ADC Linker
Na+/Ca2+ Exchanger
UGT
Bcl-6
Orphan Receptor
Bombesin Receptor
MNK
CRFR
Oxytocin Receptor
Imidazoline Receptor
ADAM
Arginase
Apelin receptor
MTP
MIF
PYK2
GlyT
Wee1
Neprilysin
DAPK
ASK
Carboxypeptidase
OCT
RANKL/RANK
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SIK
FLAP
MT Receptor
ATP Citrate Lyase
PAD
Porcupine
Methionine Adenosyltransferase (MAT)
p62
CGRP Receptor
SGK
p97
Vitamin
CRM1
Melanin-concentrating Hormone Receptor (MCHR)
Prolyl Endopeptidase (PREP)
LIM Kinase
cGAS
Cadherin
CRISPR/Cas9
Aquaporin
CAT
Arp2/3 Complex
Na-K-Cl cotransporter
HCN Channel
Thrombopoietin Receptor
PSMA
TSH Receptor
APC/C
TOPK
CETP
Galectin
Neuropeptide FF Receptor
MRGPR
Cuproptosis
REV-ERB
Adenosine Deaminase
Taste receptor
CD38
MALT
Succinate Receptor 1 (SUCNR1)
NPC1L1
RAR/RXR
NEDD8
AAK1
ASCT
Haspin Kinase
Decarboxylase
HCAR
KLF
Dipeptidyl Peptidase
Hippo pathway
BMI-1
Cell wall
ASBT
DprE1
VDAC
Hck
MTH1
FABP
Hexokinase
ACK1
AIM2
PGC-1α
MELK
Ferroportin
gp120/CD4
Advanced Glycation End Products
Photosystem (PS)
Adiponectin Receptor
AAK1 (AP2 associated kinase 1)
PANoptosis
CPT
Huntingtin
FOXO3
PGK1
Transaminase
GDNF
Kisspeptin
EBI2/GPR183
Factor VIIa
Endonuclease
PACAP
KSP
Mucin
Glutathione reductase
CD73
GluCls
HuR
Tight Junction Protein
NEDD4-1
GSNOR
CYP19A1
Glutaminyl Cyclase
Aconitase
NUDIX hydrolase
Piezo Channel
Y Box Binding Protein 1
VDA
PARG(Poly(ADP-ribose) Glycohydrolase)
Transmembrane Glycoprotein
Fas/FasL
LAG-3
GHR
Early 2 Factor (E2F)
CD74
Integrase
Transketolase
Urea Transporter
TMV
Enteropeptidase (EP)
hCE
Drug-Linker Conjugates for ADC
RXFP receptor
Lysosomal Autophagy
Glyoxalase
OLIG2
stilbene oxidase
Neuropeptide W
Procollagen C Proteinase
LHRH
Target Protein Ligand-Linker Conjugates
Stemness kinase
Anion Exchanger
N-Acetylglucosaminyltransferase
B7
Motilin Receptor
Thioredoxin
Claudin
FMO
Cholesterol synthesis
Sulfotransferase
Poly(ADP-ribose) Glycohydrolase (PARG)
Natriuretic peptide
Fer/FerT kinase
Nuclear receptor
Chemerin Receptor
MHC
GSPT1
ATTECs
MAP3K
Sodium-dependent phosphate transporter
NMU2R
IGF-2R
NMUR

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