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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 18720 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 18720 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
5-HT Receptor
Parasite
Antifungal
DNA/RNA Synthesis
AChR
NF-κB
Adrenergic Receptor
COX
Reactive Oxygen Species
Calcium Channel
Dopamine Receptor
Potassium Channel
CDK
HIV Protease
Cytochromes P450
PI3K
Ras
Antioxidant
EGFR
Dehydrogenase
Histamine Receptor
Sodium Channel
Epigenetic Reader Domain
PDE
GABA Receptor
VEGFR
Akt
TNF
p38 MAPK
Caspase
Influenza Virus
Virus Protease
PPAR
iGluR
Cholinesterase (ChE)
GluR
ERK
TRP/TRPV Channel
Histone Methyltransferase
Microtubule Associated
SARS-CoV
HDAC
JAK
Nucleoside Antimetabolite/Analog
mTOR
GPCR
Phosphatase
Bcl-2 Family
Wnt/beta-catenin
PARP
NO Synthase
Prostaglandin Receptor
Interleukin
Topoisomerase
STAT
Estrogen Receptor/ERR
Drug Metabolite
Ferroptosis
AMPK
MMP
Src
PKC
HCV Protease
Anti-infection
IL Receptor
Antiviral
Estrogen/progestogen Receptor
FLT
Opioid Receptor
Adenosine Receptor
ROS
NMDAR
RAAS
GSK-3
Androgen Receptor
PDGFR
HIF/HIF Prolyl-Hydroxylase
Mitochondrial Metabolism
TGF-beta/Smad
Beta Amyloid
FGFR
TLR
Glucocorticoid Receptor
HSP
Monoamine Oxidase
Lipoxygenase
Nrf2
Raf
c-Met/HGFR
Proteasome
Phospholipase
MAO
MDM-2/p53
MAPK
JNK
Tyrosinase
HBV
c-Kit
ALK
Cannabinoid Receptor
HSV
ATPase
Bcr-Abl
Sirtuin
Amino Acids and Derivatives
Serine Protease
Transferase
Histone Demethylase
E1/E2/E3 Enzyme
Glucosidase
Kras
Integrin
PKA
DUB
LPL Receptor
Immunology/Inflammation related
Mitophagy
PROTACs
Aurora Kinase
Casein Kinase
Antifection
P-gp
Carbonic Anhydrase
CCR
Serotonin Transporter
IκB/IKK
NOS
Tyrosine Kinases
ROCK
MEK
p53
Reverse Transcriptase
Gamma-secretase
IGF-1R
Reductase
Angiotensin-converting Enzyme (ACE)
HIF
Serine/threonin kinase
Cysteine Protease
Retinoid Receptor
NOD-like Receptor (NLR)
Histone Acetyltransferase
CXCR
Neurokinin receptor
Norepinephrine
S1P Receptor
Proton pump
RIP kinase
FAK
PERK
CaMK
Sigma receptor
P2X Receptor
Leukotriene Receptor
c-RET
S6 Kinase
Aryl Hydrocarbon Receptor
NADPH
Fatty Acid Synthase
NOD
Hedgehog/Smoothened
Acyltransferase
Ligand for E3 Ligase
DNA-PK
Molecular Glues
TAM Receptor
c-Fms
Chloride channel
transporter
Trk receptor
FAAH
ATM/ATR
Glucokinase
CFTR
DNA Methyltransferase
Syk
Progesterone Receptor
Smo
Glutathione Peroxidase
PD-1/PD-L1
HER
ribosome
Hydroxylase
Thyroid hormone receptor(THR)
Pim
Thrombin
P2Y Receptor
DPP-4
PLK
HMG-CoA Reductase
FXR
Chk
Mdm2
c-Myc
cAMP
DNA
DHFR
Cholecystokinin Receptor
DNA Alkylator/Crosslinker
Protease-activated Receptor
Glucagon Receptor
Complement System
DYRK
LTR
Endothelin Receptor
IRAK
ROS Kinase
Kinesin
Rho
ADC Cytotoxin
YAP
AhR
ROR
Factor Xa
Xanthine Oxidase
IDO
Indoleamine 2,3-Dioxygenase (IDO)
PGE Synthase
STING
Lipid
LPA Receptor
PDK
Lipase
BTK
Melanocortin Receptor
Guanylate cyclase
OXPHOS
LRRK2
Antifolate
OX Receptor
GNRH Receptor
Liver X Receptor
PAK
Platelet aggregation
IAP
MAGL
Neuropeptide Y Receptor
SGLT
MRP
BACE
IFNAR
Aminopeptidase
RSV
Isocitrate Dehydrogenase (IDH)
Vasopressin Receptor
Aromatase
Myosin
DNA Alkylation
Epoxide Hydrolase
Glutaminase
Ephrin Receptor
Beta-Secretase
Ligands for Target Protein for PROTAC
Photosensitizer
Monoamine Transporter
Bradykinin Receptor
Pyroptosis
Acetyl-CoA Carboxylase
Stearoyl-CoA Desaturase (SCD)
Telomerase
PAFR
GPCR19
PI4K
GTPase
PAI-1
GST
IRE1
LDL
CaSR
ABC Transporter
CSF-1R
MicroRNA
Monocarboxylate transporter
Arrestin
Necroptosis
Neurotensin Receptor
Somatostatin
Liposome
GHSR
PTEN
NADPH-oxidase
ATG
Tie-2
DNA gyrase
Free radical scavengers
Phosphorylase
BCRP
Survivin
Discoidin Domain Receptor (DDR)
NAMPT
NR4A
IKZF
Melatonin Receptor
FKBP
Bcl-6
MLK
PKM
UGT
Apelin receptor
MNK
Na+/Ca2+ Exchanger
MyD88
GPX
GRK
Imidazoline Receptor
MIF
Dynamin
OAT
Arginase
CRFR
Gap Junction Protein
Porcupine
FLAP
Neprilysin
OCT
Bombesin Receptor
PYK2
GlyT
Wee1
Methionine Adenosyltransferase (MAT)
SGK
Carboxypeptidase
ATP Citrate Lyase
CRISPR/Cas9
SIK
FOXO
Amylase
Prolyl Endopeptidase (PREP)
Annexin A
MT Receptor
CRM1
PAD
DAPK
p97
LIM Kinase
cGAS
p62
Melanin-concentrating Hormone Receptor (MCHR)
E3 Ligase Ligand-Linker Conjugate
CGRP Receptor
Adenylyl Cyclase
Thrombopoietin Receptor
ASK
APC/C
Protease
CAT
HCN Channel
Oxytocin Receptor
TSH Receptor
AAK1
Neuropeptide FF Receptor
RANKL/RANK
Aquaporin
Cell Cycle Arrest
MELK
REV-ERB
NEDD8
Vitamin
ADC Linker
Hippo pathway
Succinate Receptor 1 (SUCNR1)
TOPK
Decarboxylase
Adenosine Deaminase
RAR/RXR
MALT
MTP
CETP
Arp2/3 Complex
PSMA
BMI-1
Galectin
KLF
FOXO3
AIM2
CD38
VDAC
CD73
NPC1L1
LDLR
DprE1
MRGPR
Cell wall
Na-K-Cl cotransporter
ACK1
ASBT
Cuproptosis
MTH1
Hexokinase
gp120/CD4
ASCT
CPT
Adiponectin Receptor
PROTAC Linker
Taste receptor
Cadherin
Advanced Glycation End Products
Hck
AAK1 (AP2 associated kinase 1)
PGK1
Haspin Kinase
Orphan Receptor
EBI2/GPR183
Factor VIIa
Endonuclease
Kisspeptin
Glutathione reductase
FABP
KSP
Huntingtin
GluCls
HuR
Transaminase
Mucin
GSNOR
Y Box Binding Protein 1
GDNF
VDA
PARG(Poly(ADP-ribose) Glycohydrolase)
Photosystem (PS)
Transketolase
glycosidase
Aconitase
Integrase
PACAP
RXFP receptor
Piezo Channel
NUDIX hydrolase
Fas/FasL
hCE
TMV
Lysosomal Autophagy
ATTECs
Glyoxalase
Glutaminyl Cyclase
HCAR
Drug-Linker Conjugates for ADC
NEDD4-1
OLIG2
LHRH
stilbene oxidase
N-Acetylglucosaminyltransferase
Anion Exchanger
CD74
Motilin Receptor
Thioredoxin
Neuropeptide W
Procollagen C Proteinase
Stemness kinase
Early 2 Factor (E2F)
Poly(ADP-ribose) Glycohydrolase (PARG)
Enteropeptidase (EP)
MAP3K
Urea Transporter
CYP19A1
B7
Target Protein Ligand-Linker Conjugate
AUTACs
Fer/FerT kinase
Tight Junction Protein
Ferroportin
IGF-2R
Sodium-dependent phosphate transporter
PGC-1α
NMU2R
NMUR

Keywords