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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19650 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 10 μL x 10 mM (in DMSO)
  • 20 μL x 10 mM (in DMSO)
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19650 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
PI3K
Dopamine Receptor
CDK
Cytochromes P450
Akt
HIV Protease
Ras
p38 MAPK
Antioxidant
Interleukin
TNF
Caspase
Dehydrogenase
ERK
Histamine Receptor
Sodium Channel
EGFR
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Drug Metabolite
Cholinesterase (ChE)
Influenza Virus
mTOR
Wnt/beta-catenin
Microtubule Associated
Phosphatase
Histone Methyltransferase
STAT
GluR
SARS-CoV
TRP/TRPV Channel
Nucleoside Antimetabolite/Analog
Bcl-2 Family
Prostaglandin Receptor
HDAC
JAK
Ferroptosis
GPCR
Estrogen Receptor/ERR
MMP
PARP
AMPK
Topoisomerase
IL Receptor
Src
JNK
Mitochondrial Metabolism
Nrf2
PKC
TLR
Beta Amyloid
Anti-infection
HCV Protease
Antiviral
GSK-3
TGF-beta/Smad
Adenosine Receptor
FLT
Opioid Receptor
Estrogen/progestogen Receptor
RAAS
NMDAR
PDGFR
Androgen Receptor
Monoamine Oxidase
Glucocorticoid Receptor
Amino Acids and Derivatives
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
HSP
Tyrosinase
FGFR
Proteasome
MAPK
Phospholipase
HSV
Lipoxygenase
Raf
HBV
c-Met/HGFR
MAO
c-Kit
ATPase
Immunology/Inflammation related
ALK
Cannabinoid Receptor
Bcr-Abl
PROTACs
E1/E2/E3 Enzyme
Sirtuin
Serine Protease
P-gp
Transferase
Integrin
Reductase
PKA
Histone Demethylase
DUB
Kras
NOD-like Receptor (NLR)
Glucosidase
LPL Receptor
MEK
Casein Kinase
Antifection
Mitophagy
Carbonic Anhydrase
Aurora Kinase
Serotonin Transporter
CCR
glycosidase
IGF-1R
NOS
IκB/IKK
p53
PERK
ROCK
Tyrosine Kinases
Reverse Transcriptase
Gamma-secretase
CXCR
Angiotensin-converting Enzyme (ACE)
Serine/threonin kinase
Cysteine Protease
Neurokinin receptor
Retinoid Receptor
HIF
Histone Acetyltransferase
CaMK
P2X Receptor
Proton pump
RIP kinase
FAK
S1P Receptor
Acyltransferase
Norepinephrine
NOD
Sigma receptor
Leukotriene Receptor
Aryl Hydrocarbon Receptor
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NADPH
CFTR
Trk receptor
c-RET
Molecular Glues
transporter
S6 Kinase
Glutathione Peroxidase
Chloride channel
ATM/ATR
TAM Receptor
PD-1/PD-L1
c-Fms
DNA-PK
Ligands for E3 Ligase
FAAH
Progesterone Receptor
HMG-CoA Reductase
Thrombin
Glucokinase
DNA Alkylator/Crosslinker
Kinesin
Lipase
YAP
Chk
PLK
Syk
Thyroid hormone receptor(THR)
Smo
Xanthine Oxidase
DNA Methyltransferase
c-Myc
ROS Kinase
HER
DHFR
DNA
FXR
IRAK
ribosome
Hydroxylase
Pim
Lipid
P2Y Receptor
DPP-4
Cholecystokinin Receptor
STING
Mdm2
Glucagon Receptor
Complement System
Liver X Receptor
Indoleamine 2,3-Dioxygenase (IDO)
IDO
PDK
LTR
Rho
cAMP
Melanocortin Receptor
Antifolate
Protease-activated Receptor
IFNAR
AhR
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OXPHOS
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ROR
BTK
IAP
Factor Xa
Platelet aggregation
Necroptosis
Neuropeptide Y Receptor
LPA Receptor
E3 Ligase Ligand-Linker Conjugates
Guanylate cyclase
Pyroptosis
GNRH Receptor
OX Receptor
Aminopeptidase
RSV
MAGL
LRRK2
Vasopressin Receptor
MRP
SGLT
Photosensitizer
PAK
PAI-1
Glutaminase
Stearoyl-CoA Desaturase (SCD)
Ligands for Target Protein for PROTAC
PAFR
Myosin
Bradykinin Receptor
Epoxide Hydrolase
Acetyl-CoA Carboxylase
Isocitrate Dehydrogenase (IDH)
Aromatase
DNA Alkylation
Beta-Secretase
Arrestin
BACE
PI4K
ABC Transporter
IRE1
Ephrin Receptor
Liposome
Survivin
Telomerase
Monoamine Transporter
GTPase
GST
Cell Cycle Arrest
GPCR19
ATG
Monocarboxylate transporter
LDL
Free radical scavengers
Neurotensin Receptor
Phosphorylase
LDLR
CSF-1R
FOXO
MyD88
CaSR
PKM
Adenylate cyclase
Somatostatin
MicroRNA
NR4A
PROTAC Linker
PTEN
GPX
MLK
BCRP
OAT
IKZF
Amylase
DNA gyrase
NAMPT
GHSR
NADPH-oxidase
Discoidin Domain Receptor (DDR)
Tie-2
Melatonin Receptor
FKBP
Gap Junction Protein
UGT
GRK
Dynamin
ADC Linker
Na+/Ca2+ Exchanger
CRFR
Imidazoline Receptor
Bcl-6
Apelin receptor
Orphan receptor
MNK
Neprilysin
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Carboxypeptidase
Oxytocin Receptor
MIF
PYK2
GlyT
Wee1
ASK
DAPK
Bombesin Receptor
Protease
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SIK
FLAP
ATP Citrate Lyase
Porcupine
p62
Prolyl Endopeptidase (PREP)
CGRP Receptor
Methionine Adenosyltransferase (MAT)
p97
OCT
RANKL/RANK
Annexin A
MT Receptor
SGK
LIM Kinase
Vitamin
cGAS
Cadherin
CRM1
PAD
Aquaporin
CRISPR/Cas9
TSH Receptor
CAT
HCN Channel
APC/C
Thrombopoietin Receptor
Arp2/3 Complex
Na-K-Cl cotransporter
PSMA
MTP
TOPK
AAK1
Neuropeptide FF Receptor
Adenosine Deaminase
MRGPR
REV-ERB
CETP
Galectin
Taste receptor
NPC1L1
Succinate Receptor 1 (SUCNR1)
Decarboxylase
CD38
NEDD8
Hippo pathway
RAR/RXR
MALT
ASCT
MELK
Cuproptosis
BMI-1
Haspin Kinase
HCAR
KLF
FOXO3
VDAC
CD73
DprE1
FABP
ASBT
Hck
ACK1
MTH1
Hexokinase
Photosystem (PS)
Adiponectin Receptor
Huntingtin
Ferroportin
gp120/CD4
AIM2
CPT
PGK1
Advanced Glycation End Products
Cell wall
AAK1 (AP2 associated kinase 1)
Kisspeptin
Glutathione reductase
GDNF
Factor VIIa
Endonuclease
PACAP
KSP
GluCls
EBI2/GPR183
Transaminase
Mucin
HuR
NEDD4-1
Tight Junction Protein
Drug-Linker Conjugates for ADC
Aconitase
Integrase
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Transketolase
CD74
RXFP receptor
GSNOR
Y Box Binding Protein 1
GHR
Lysosomal Autophagy
Glyoxalase
Glutaminyl Cyclase
Urea Transporter
NUDIX hydrolase
Piezo Channel
Fas/FasL
Early 2 Factor (E2F)
hCE
TMV
CYP19A1
Transmembrane Glycoprotein
OLIG2
Motilin Receptor
Thioredoxin
stilbene oxidase
N-Acetylglucosaminyltransferase
Target Protein Ligand-Linker Conjugates
Anion Exchanger
FMO
Neuropeptide W
PGC-1α
Sulfotransferase
LHRH
MHC
Natriuretic peptide
Nuclear receptor
Enteropeptidase (EP)
ATTECs
MAP3K
Chemerin Receptor
Procollagen C Proteinase
Stemness kinase
Cholesterol synthesis
Poly(ADP-ribose) Glycohydrolase (PARG)
B7
Fer/FerT kinase
Sodium-dependent phosphate transporter
IGF-2R
NMU2R
NMUR

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