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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 18720 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 18720 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
5-HT Receptor
Parasite
Antifungal
DNA/RNA Synthesis
AChR
NF-κB
Adrenergic Receptor
COX
Reactive Oxygen Species
Calcium Channel
Dopamine Receptor
Potassium Channel
CDK
HIV Protease
Cytochromes P450
PI3K
Ras
Antioxidant
EGFR
Dehydrogenase
Histamine Receptor
Sodium Channel
Epigenetic Reader Domain
PDE
GABA Receptor
VEGFR
Akt
TNF
p38 MAPK
Caspase
Influenza Virus
Virus Protease
PPAR
iGluR
Cholinesterase (ChE)
GluR
TRP/TRPV Channel
ERK
Microtubule Associated
Histone Methyltransferase
SARS-CoV
HDAC
JAK
Nucleoside Antimetabolite/Analog
mTOR
GPCR
Phosphatase
Wnt/beta-catenin
Bcl-2 Family
PARP
NO Synthase
Prostaglandin Receptor
Interleukin
Topoisomerase
STAT
Ferroptosis
Estrogen Receptor/ERR
Drug Metabolite
AMPK
MMP
Src
PKC
HCV Protease
IL Receptor
Anti-infection
Estrogen/progestogen Receptor
Antiviral
FLT
Opioid Receptor
Adenosine Receptor
ROS
RAAS
NMDAR
GSK-3
Androgen Receptor
PDGFR
HIF/HIF Prolyl-Hydroxylase
Mitochondrial Metabolism
TGF-beta/Smad
Beta Amyloid
FGFR
Glucocorticoid Receptor
TLR
HSP
Monoamine Oxidase
Raf
Lipoxygenase
Nrf2
c-Met/HGFR
Proteasome
Phospholipase
MAO
MAPK
MDM-2/p53
JNK
Tyrosinase
HBV
c-Kit
ALK
Cannabinoid Receptor
HSV
ATPase
Bcr-Abl
Sirtuin
Amino Acids and Derivatives
Serine Protease
Transferase
E1/E2/E3 Enzyme
Histone Demethylase
Glucosidase
Kras
Integrin
PKA
DUB
LPL Receptor
Immunology/Inflammation related
PROTACs
Mitophagy
Aurora Kinase
Casein Kinase
Antifection
P-gp
NOS
Carbonic Anhydrase
CCR
IκB/IKK
Tyrosine Kinases
ROCK
MEK
p53
Serotonin Transporter
Reverse Transcriptase
Gamma-secretase
Reductase
IGF-1R
Angiotensin-converting Enzyme (ACE)
Serine/threonin kinase
HIF
Cysteine Protease
Retinoid Receptor
NOD-like Receptor (NLR)
CXCR
Histone Acetyltransferase
Neurokinin receptor
Norepinephrine
S1P Receptor
Proton pump
RIP kinase
FAK
PERK
P2X Receptor
CaMK
Sigma receptor
Leukotriene Receptor
c-RET
S6 Kinase
NADPH
Aryl Hydrocarbon Receptor
Fatty Acid Synthase
Hedgehog/Smoothened
Acyltransferase
Ligand for E3 Ligase
NOD
DNA-PK
Molecular Glues
c-Fms
TAM Receptor
Chloride channel
Trk receptor
transporter
Glucokinase
FAAH
ATM/ATR
CFTR
Syk
DNA Methyltransferase
Glutathione Peroxidase
Progesterone Receptor
Smo
PD-1/PD-L1
HER
Thyroid hormone receptor(THR)
P2Y Receptor
Pim
DPP-4
ribosome
Hydroxylase
PLK
HMG-CoA Reductase
Thrombin
Chk
Mdm2
DHFR
DNA Alkylator/Crosslinker
c-Myc
Cholecystokinin Receptor
FXR
Glucagon Receptor
cAMP
DNA
Complement System
Protease-activated Receptor
LTR
DYRK
Endothelin Receptor
IRAK
ROS Kinase
Kinesin
ADC Cytotoxin
ROR
YAP
Rho
AhR
Factor Xa
IDO
Xanthine Oxidase
Indoleamine 2,3-Dioxygenase (IDO)
PGE Synthase
Lipase
Lipid
STING
LPA Receptor
PDK
BTK
Antifolate
Guanylate cyclase
OX Receptor
OXPHOS
LRRK2
Melanocortin Receptor
GNRH Receptor
MRP
Liver X Receptor
IAP
MAGL
Neuropeptide Y Receptor
PAK
SGLT
Platelet aggregation
IFNAR
BACE
RSV
Glutaminase
Myosin
Isocitrate Dehydrogenase (IDH)
DNA Alkylation
Vasopressin Receptor
Epoxide Hydrolase
Aminopeptidase
Aromatase
Ligands for Target Protein for PROTAC
Beta-Secretase
Ephrin Receptor
Photosensitizer
PAFR
Monoamine Transporter
Stearoyl-CoA Desaturase (SCD)
Bradykinin Receptor
Telomerase
GPCR19
Pyroptosis
Acetyl-CoA Carboxylase
PI4K
GTPase
IRE1
LDL
PAI-1
GST
MicroRNA
CaSR
CSF-1R
ABC Transporter
Monocarboxylate transporter
Arrestin
Necroptosis
Neurotensin Receptor
Somatostatin
Liposome
PTEN
GHSR
NADPH-oxidase
Tie-2
ATG
Phosphorylase
DNA gyrase
BCRP
Survivin
Free radical scavengers
Discoidin Domain Receptor (DDR)
Apelin receptor
MyD88
Melatonin Receptor
Bcl-6
NAMPT
NR4A
UGT
IKZF
MNK
FKBP
MLK
PKM
Dynamin
Na+/Ca2+ Exchanger
MIF
OAT
GPX
Imidazoline Receptor
Arginase
OCT
PYK2
FLAP
GRK
GlyT
Bombesin Receptor
Wee1
Porcupine
CRFR
Methionine Adenosyltransferase (MAT)
Neprilysin
SGK
Gap Junction Protein
CRM1
LIM Kinase
Amylase
SIK
Prolyl Endopeptidase (PREP)
Annexin A
MT Receptor
PAD
ATP Citrate Lyase
Carboxypeptidase
CRISPR/Cas9
FOXO
DAPK
p97
Melanin-concentrating Hormone Receptor (MCHR)
Adenylyl Cyclase
E3 Ligase Ligand-Linker Conjugate
Thrombopoietin Receptor
cGAS
ASK
p62
Protease
CGRP Receptor
APC/C
CAT
AAK1
Cell Cycle Arrest
RANKL/RANK
Neuropeptide FF Receptor
HCN Channel
TSH Receptor
Oxytocin Receptor
Aquaporin
RAR/RXR
MALT
MTP
NEDD8
Succinate Receptor 1 (SUCNR1)
CETP
TOPK
Galectin
Vitamin
Arp2/3 Complex
PSMA
Decarboxylase
ADC Linker
MELK
KLF
Adenosine Deaminase
REV-ERB
BMI-1
FOXO3
NPC1L1
CD38
ASBT
DprE1
Cell wall
VDAC
LDLR
MTH1
Na-K-Cl cotransporter
Hexokinase
ACK1
MRGPR
CD73
AIM2
Hippo pathway
Cuproptosis
Advanced Glycation End Products
Taste receptor
gp120/CD4
ASCT
Hck
Adiponectin Receptor
Haspin Kinase
AAK1 (AP2 associated kinase 1)
PROTAC Linker
Cadherin
Orphan Receptor
CPT
PGK1
Transaminase
EBI2/GPR183
Factor VIIa
Kisspeptin
Endonuclease
FABP
KSP
Mucin
Huntingtin
Glutathione reductase
GluCls
HuR
NEDD4-1
GSNOR
GDNF
Piezo Channel
NUDIX hydrolase
Y Box Binding Protein 1
Glutaminyl Cyclase
Aconitase
VDA
PARG(Poly(ADP-ribose) Glycohydrolase)
Photosystem (PS)
Fas/FasL
PACAP
Integrase
HCAR
Transketolase
glycosidase
hCE
Drug-Linker Conjugates for ADC
TMV
RXFP receptor
ATTECs
Lysosomal Autophagy
Glyoxalase
OLIG2
stilbene oxidase
CYP19A1
Procollagen C Proteinase
Neuropeptide W
LHRH
N-Acetylglucosaminyltransferase
B7
Stemness kinase
Motilin Receptor
Anion Exchanger
Thioredoxin
Target Protein Ligand-Linker Conjugate
Early 2 Factor (E2F)
AUTACs
Urea Transporter
CD74
Poly(ADP-ribose) Glycohydrolase (PARG)
Fer/FerT kinase
MAP3K
Tight Junction Protein
Enteropeptidase (EP)
Ferroportin
Sodium-dependent phosphate transporter
PGC-1α
NMU2R
IGF-2R
NMUR

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