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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19650 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 10 μL x 10 mM (in DMSO)
  • 20 μL x 10 mM (in DMSO)
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19650 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
PI3K
Dopamine Receptor
CDK
Cytochromes P450
Akt
HIV Protease
Ras
p38 MAPK
Antioxidant
Interleukin
TNF
Caspase
Dehydrogenase
ERK
Histamine Receptor
Sodium Channel
EGFR
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Drug Metabolite
Cholinesterase (ChE)
Influenza Virus
mTOR
Microtubule Associated
Wnt/beta-catenin
Phosphatase
Histone Methyltransferase
STAT
GluR
SARS-CoV
TRP/TRPV Channel
Nucleoside Antimetabolite/Analog
Bcl-2 Family
HDAC
Prostaglandin Receptor
Ferroptosis
JAK
GPCR
Estrogen Receptor/ERR
MMP
PARP
AMPK
Topoisomerase
IL Receptor
Src
JNK
Mitochondrial Metabolism
Nrf2
PKC
TLR
Beta Amyloid
Anti-infection
Antiviral
HCV Protease
Adenosine Receptor
GSK-3
Estrogen/progestogen Receptor
FLT
TGF-beta/Smad
Opioid Receptor
RAAS
NMDAR
Androgen Receptor
PDGFR
Monoamine Oxidase
Glucocorticoid Receptor
Amino Acids and Derivatives
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
HSP
Tyrosinase
Proteasome
FGFR
MAPK
Lipoxygenase
Phospholipase
Raf
HSV
c-Met/HGFR
HBV
MAO
c-Kit
ATPase
ALK
Immunology/Inflammation related
Bcr-Abl
Cannabinoid Receptor
Serine Protease
PROTACs
E1/E2/E3 Enzyme
Sirtuin
Transferase
P-gp
Integrin
Reductase
PKA
DUB
Histone Demethylase
Kras
NOD-like Receptor (NLR)
Glucosidase
LPL Receptor
MEK
Antifection
Casein Kinase
Mitophagy
Aurora Kinase
Carbonic Anhydrase
Serotonin Transporter
CCR
glycosidase
IGF-1R
NOS
IκB/IKK
p53
ROCK
PERK
Reverse Transcriptase
Gamma-secretase
Tyrosine Kinases
Angiotensin-converting Enzyme (ACE)
CXCR
Serine/threonin kinase
Cysteine Protease
HIF
Neurokinin receptor
Retinoid Receptor
Histone Acetyltransferase
CaMK
P2X Receptor
S1P Receptor
RIP kinase
FAK
Proton pump
Acyltransferase
NOD
Sigma receptor
Norepinephrine
Leukotriene Receptor
Aryl Hydrocarbon Receptor
Hedgehog/Smoothened
Fatty Acid Synthase
NADPH
Trk receptor
CFTR
c-RET
Molecular Glues
transporter
S6 Kinase
Chloride channel
Glutathione Peroxidase
ATM/ATR
c-Fms
PD-1/PD-L1
TAM Receptor
DNA-PK
Ligands for E3 Ligase
Thrombin
Progesterone Receptor
Glucokinase
HMG-CoA Reductase
FAAH
Lipase
Kinesin
DNA Alkylator/Crosslinker
Chk
PLK
Syk
YAP
Thyroid hormone receptor(THR)
Smo
DNA Methyltransferase
Xanthine Oxidase
ROS Kinase
Pim
HER
c-Myc
DHFR
P2Y Receptor
DPP-4
IRAK
Lipid
DNA
ribosome
Hydroxylase
FXR
Mdm2
Cholecystokinin Receptor
Glucagon Receptor
Complement System
STING
Liver X Receptor
Indoleamine 2,3-Dioxygenase (IDO)
IDO
PDK
Rho
cAMP
Melanocortin Receptor
Antifolate
Protease-activated Receptor
IFNAR
AhR
LTR
DYRK
Endothelin Receptor
PGE Synthase
OXPHOS
ADC Cytotoxin
ROR
BTK
Factor Xa
Platelet aggregation
Necroptosis
Neuropeptide Y Receptor
LPA Receptor
IAP
GNRH Receptor
RSV
OX Receptor
Aminopeptidase
E3 Ligase Ligand-Linker Conjugates
Guanylate cyclase
Pyroptosis
Vasopressin Receptor
MRP
SGLT
MAGL
LRRK2
Photosensitizer
PAK
PAI-1
Ligands for Target Protein for PROTAC
PAFR
Glutaminase
Stearoyl-CoA Desaturase (SCD)
Isocitrate Dehydrogenase (IDH)
Aromatase
Myosin
Bradykinin Receptor
Epoxide Hydrolase
Acetyl-CoA Carboxylase
DNA Alkylation
Beta-Secretase
PI4K
BACE
Arrestin
Ephrin Receptor
Survivin
Liposome
Telomerase
ABC Transporter
IRE1
GTPase
GST
Cell Cycle Arrest
GPCR19
Monoamine Transporter
Neurotensin Receptor
Phosphorylase
ATG
Monocarboxylate transporter
LDL
Free radical scavengers
CaSR
LDLR
CSF-1R
FOXO
MicroRNA
Adenylate cyclase
Somatostatin
MyD88
PKM
OAT
BCRP
NR4A
PROTAC Linker
PTEN
GPX
MLK
IKZF
NAMPT
GHSR
Discoidin Domain Receptor (DDR)
Amylase
DNA gyrase
NADPH-oxidase
Gap Junction Protein
Tie-2
Dynamin
UGT
GRK
Melatonin Receptor
FKBP
Na+/Ca2+ Exchanger
CRFR
Apelin receptor
Orphan receptor
MNK
Bcl-6
ADC Linker
Imidazoline Receptor
Arginase
Carboxypeptidase
Oxytocin Receptor
Neprilysin
Protease
MIF
PYK2
GlyT
Wee1
ASK
DAPK
Bombesin Receptor
Melanin-concentrating Hormone Receptor (MCHR)
SIK
FLAP
Methionine Adenosyltransferase (MAT)
p97
OCT
RANKL/RANK
Annexin A
MT Receptor
SGK
ATP Citrate Lyase
Porcupine
p62
Prolyl Endopeptidase (PREP)
CGRP Receptor
Vitamin
LIM Kinase
CRM1
PAD
Aquaporin
cGAS
CRISPR/Cas9
Cadherin
CAT
HCN Channel
Thrombopoietin Receptor
APC/C
Arp2/3 Complex
Na-K-Cl cotransporter
PSMA
TSH Receptor
MTP
REV-ERB
TOPK
Neuropeptide FF Receptor
Adenosine Deaminase
Galectin
CETP
MRGPR
ASCT
MELK
Taste receptor
NPC1L1
Succinate Receptor 1 (SUCNR1)
AAK1
Decarboxylase
Haspin Kinase
HCAR
KLF
Cuproptosis
BMI-1
CD38
NEDD8
Hippo pathway
RAR/RXR
MALT
FOXO3
MTH1
Hexokinase
ASBT
Hck
ACK1
VDAC
CD73
DprE1
FABP
Ferroportin
gp120/CD4
AIM2
CPT
PGK1
Advanced Glycation End Products
Cell wall
AAK1 (AP2 associated kinase 1)
Photosystem (PS)
Adiponectin Receptor
Huntingtin
EBI2/GPR183
Kisspeptin
Glutathione reductase
NEDD4-1
Tight Junction Protein
Transaminase
Mucin
HuR
GDNF
Factor VIIa
Endonuclease
PACAP
KSP
GluCls
Drug-Linker Conjugates for ADC
GSNOR
Y Box Binding Protein 1
GHR
Aconitase
Integrase
CYP19A1
Transmembrane Glycoprotein
Glutaminyl Cyclase
Urea Transporter
Lysosomal Autophagy
Piezo Channel
NUDIX hydrolase
Fas/FasL
Early 2 Factor (E2F)
hCE
TMV
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Transketolase
CD74
RXFP receptor
Glyoxalase
OLIG2
LHRH
MHC
Natriuretic peptide
Motilin Receptor
Thioredoxin
B7
Fer/FerT kinase
Chemerin Receptor
Enteropeptidase (EP)
Nuclear receptor
Procollagen C Proteinase
Stemness kinase
Cholesterol synthesis
Poly(ADP-ribose) Glycohydrolase (PARG)
stilbene oxidase
N-Acetylglucosaminyltransferase
Target Protein Ligand-Linker Conjugates
Anion Exchanger
FMO
Neuropeptide W
PGC-1α
Sulfotransferase
ATTECs
MAP3K
IGF-2R
NMU2R
Sodium-dependent phosphate transporter
NMUR

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