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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 17839 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 17839 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
5-HT Receptor
Antifungal
AChR
Adrenergic Receptor
Parasite
DNA/RNA Synthesis
NF-κB
COX
Dopamine Receptor
CDK
Calcium Channel
Potassium Channel
HIV Protease
Antioxidant
PI3K
EGFR
Histamine Receptor
Cytochromes P450
Epigenetic Reader Domain
Sodium Channel
Dehydrogenase
PDE
GABA Receptor
VEGFR
Reactive Oxygen Species
GluR
Histone Methyltransferase
TRP/TRPV Channel
Influenza Virus
PPAR
Microtubule Associated
HDAC
Cholinesterase (ChE)
TNF
Wnt/beta-catenin
Phosphatase
JAK
Akt
mTOR
Topoisomerase
GPCR
p38 MAPK
Prostaglandin Receptor
Antiviral
ERK
Estrogen/progestogen Receptor
Ferroptosis
Src
SARS-CoV
PKC
NMDAR
FLT
Adenosine Receptor
PARP
HCV Protease
RAAS
Estrogen Receptor/ERR
IL Receptor
STAT
Nucleoside Antimetabolite/Analog
iGluR
PDGFR
Opioid Receptor
AMPK
Caspase
FGFR
MMP
Glucocorticoid Receptor
Bcl-2 Family
Virus Protease
NO Synthase
GSK-3
Androgen Receptor
MAO
ROS
Raf
TLR
Lipoxygenase
HSP
c-Kit
ATPase
Cannabinoid Receptor
Bcr-Abl
c-Met/HGFR
ALK
Phospholipase
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TGF-beta/Smad
HBV
Sirtuin
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Mitochondrial Metabolism
MAPK
HSV
Drug Metabolite
Nrf2
Histone Demethylase
Ras
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Anti-infection
Integrin
DUB
NOS
JNK
p53
Tyrosine Kinases
Aurora Kinase
Immunology/Inflammation related
CCR
Mitophagy
PKA
PROTACs
E1/E2/E3 Enzyme
ROCK
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Transferase
Carbonic Anhydrase
P-gp
MEK
HIF
Casein Kinase
Gamma-secretase
Interleukin
IκB/IKK
Monoamine Oxidase
Reverse Transcriptase
Retinoid Receptor
Cysteine Protease
S1P Receptor
Norepinephrine
Serotonin Transporter
RIP kinase
CXCR
P2X Receptor
Serine/threonin kinase
Neurokinin receptor
IGF-1R
Reductase
Glucosidase
c-RET
Serine Protease
FAK
LPL Receptor
NOD
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Histone Acetyltransferase
TAM Receptor
Sigma receptor
FAAH
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CaMK
S6 Kinase
PERK
Trk receptor
HER
NADPH
transporter
Progesterone Receptor
ribosome
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PLK
Syk
Acyltransferase
DNA Methyltransferase
Mdm2
Endothelin Receptor
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Rho
DNA
Protease-activated Receptor
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cAMP
LTR
Aryl Hydrocarbon Receptor
DHFR
P2Y Receptor
Glucagon Receptor
AhR
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STING
Thyroid hormone receptor(THR)
Cholecystokinin Receptor
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ROR
Leukotriene Receptor
Lipase
LPA Receptor
DYRK
Hydroxylase
LRRK2
MRP
Complement System
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SGLT
PDK
BTK
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OX Receptor
Indoleamine 2,3-Dioxygenase (IDO)
BACE
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Kras
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Aromatase
PAK
Ephrin Receptor
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IRE1
Ligand for E3 Ligase
ROS Kinase
PGE Synthase
NOD-like Receptor (NLR)
GTPase
Myosin
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Photosensitizer
Melanocortin Receptor
ABC Transporter
LDL
CSF-1R
PI4K
Molecular Glues
Telomerase
GNRH Receptor
Monoamine Transporter
Bradykinin Receptor
NADPH-oxidase
Glutaminase
GPCR19
Lipid
PAI-1
GHSR
Monocarboxylate transporter
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Acetyl-CoA Carboxylase
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Neurotensin Receptor
Aminopeptidase
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Arrestin
DNA gyrase
Somatostatin
Discoidin Domain Receptor (DDR)
PAFR
IFNAR
IDO
Stearoyl-CoA Desaturase (SCD)
NAMPT
Isocitrate Dehydrogenase (IDH)
GPX
PKM
Ligands for Target Protein for PROTAC
MNK
GRK
Phosphorylase
Neprilysin
MLK
Imidazoline Receptor
UGT
BCRP
Dynamin
OAT
IKZF
Arginase
Na+/Ca2+ Exchanger
ATP Citrate Lyase
Porcupine
Melatonin Receptor
Wee1
Apelin receptor
LIM Kinase
Angiotensin-converting Enzyme (ACE)
Bcl-6
MT Receptor
SGK
GST
Carboxypeptidase
Gap Junction Protein
PTEN
Tie-2
AAK1
SIK
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GlyT
PAD
ASK
Protease
APC/C
OCT
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CRFR
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TSH Receptor
MyD88
Amylase
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p97
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DAPK
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Orphan Receptor
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ACK1
BMI-1
gp120/CD4
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CD38
VDAC
Adiponectin Receptor
p62
NPC1L1
Succinate Receptor 1 (SUCNR1)
LDLR
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Thrombopoietin Receptor
PGK1
Hexokinase
Advanced Glycation End Products
Hck
RANKL/RANK
FOXO3
Vitamin
ASCT
CPT
Factor VIIa
FABP
KSP
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GluCls
Glutathione reductase
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KLF
Liposome
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Na-K-Cl cotransporter
PSMA
HuR
GSNOR
EBI2/GPR183
GDNF
VDA
PROTAC Linker
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ADC Linker
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PACAP
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RXFP receptor
Taste receptor
E3 Ligase Ligand-Linker Conjugate
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hCE
OLIG2
Y Box Binding Protein 1
REV-ERB
MDM-2/p53
stilbene oxidase
N-Acetylglucosaminyltransferase
Photosystem (PS)
Endonuclease
Anion Exchanger
glycosidase
CD74
Neuropeptide W
Aconitase
Motilin Receptor
Thioredoxin
Enteropeptidase (EP)
MAP3K
Mucin
Urea Transporter
Cuproptosis
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B7
HCAR
Fer/FerT kinase
Tight Junction Protein
Procollagen C Proteinase
Stemness kinase
TMV
NMU2R
Ferroportin
IGF-2R
PARG(Poly(ADP-ribose) Glycohydrolase)
Sodium-dependent phosphate transporter
PGC-1α
Poly(ADP-ribose) Glycohydrolase (PARG)

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