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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19650 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 10 μL x 10 mM (in DMSO)
  • 20 μL x 10 mM (in DMSO)
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19650 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
PI3K
Dopamine Receptor
CDK
Cytochromes P450
Akt
HIV Protease
Ras
Antioxidant
p38 MAPK
Interleukin
TNF
Caspase
Dehydrogenase
ERK
Histamine Receptor
Sodium Channel
EGFR
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Drug Metabolite
Cholinesterase (ChE)
Influenza Virus
mTOR
Wnt/beta-catenin
Microtubule Associated
Phosphatase
Histone Methyltransferase
STAT
GluR
TRP/TRPV Channel
SARS-CoV
Nucleoside Antimetabolite/Analog
Bcl-2 Family
Prostaglandin Receptor
HDAC
Ferroptosis
JAK
GPCR
Estrogen Receptor/ERR
MMP
PARP
Topoisomerase
AMPK
IL Receptor
Src
JNK
Mitochondrial Metabolism
Nrf2
PKC
TLR
Anti-infection
Beta Amyloid
HCV Protease
Antiviral
Adenosine Receptor
Estrogen/progestogen Receptor
FLT
GSK-3
Opioid Receptor
TGF-beta/Smad
RAAS
NMDAR
PDGFR
Androgen Receptor
Monoamine Oxidase
Glucocorticoid Receptor
Amino Acids and Derivatives
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
Tyrosinase
HSP
FGFR
Proteasome
MAPK
Lipoxygenase
HSV
Raf
Phospholipase
c-Met/HGFR
HBV
MAO
c-Kit
ATPase
ALK
Immunology/Inflammation related
Bcr-Abl
Cannabinoid Receptor
PROTACs
E1/E2/E3 Enzyme
Sirtuin
Serine Protease
P-gp
Transferase
Integrin
Reductase
PKA
Histone Demethylase
DUB
Kras
NOD-like Receptor (NLR)
LPL Receptor
Glucosidase
MEK
Casein Kinase
Antifection
Carbonic Anhydrase
Aurora Kinase
Mitophagy
CCR
glycosidase
Serotonin Transporter
IGF-1R
NOS
p53
IκB/IKK
PERK
ROCK
Tyrosine Kinases
Gamma-secretase
Reverse Transcriptase
CXCR
Angiotensin-converting Enzyme (ACE)
Serine/threonin kinase
Cysteine Protease
HIF
Retinoid Receptor
Neurokinin receptor
Histone Acetyltransferase
CaMK
P2X Receptor
S1P Receptor
RIP kinase
FAK
Proton pump
Norepinephrine
NOD
Sigma receptor
Acyltransferase
Leukotriene Receptor
Aryl Hydrocarbon Receptor
NADPH
Hedgehog/Smoothened
Trk receptor
Fatty Acid Synthase
CFTR
Molecular Glues
transporter
c-RET
Chloride channel
Glutathione Peroxidase
S6 Kinase
ATM/ATR
c-Fms
PD-1/PD-L1
TAM Receptor
Ligands for E3 Ligase
DNA-PK
Thrombin
Progesterone Receptor
FAAH
Glucokinase
HMG-CoA Reductase
DNA Alkylator/Crosslinker
Lipase
Kinesin
Chk
PLK
Syk
YAP
Xanthine Oxidase
DNA Methyltransferase
Smo
ROS Kinase
HER
Pim
Thyroid hormone receptor(THR)
c-Myc
DNA
FXR
P2Y Receptor
DPP-4
IRAK
ribosome
Hydroxylase
DHFR
Mdm2
STING
Glucagon Receptor
Lipid
Cholecystokinin Receptor
Liver X Receptor
Complement System
Indoleamine 2,3-Dioxygenase (IDO)
IDO
PDK
Rho
cAMP
Melanocortin Receptor
LTR
Antifolate
Protease-activated Receptor
IFNAR
AhR
DYRK
OXPHOS
PGE Synthase
Endothelin Receptor
ADC Cytotoxin
ROR
BTK
Factor Xa
Platelet aggregation
IAP
Necroptosis
Neuropeptide Y Receptor
LPA Receptor
GNRH Receptor
E3 Ligase Ligand-Linker Conjugates
Guanylate cyclase
Pyroptosis
RSV
OX Receptor
Aminopeptidase
Vasopressin Receptor
MAGL
LRRK2
MRP
SGLT
Photosensitizer
PAK
PAI-1
Ligands for Target Protein for PROTAC
PAFR
Glutaminase
Stearoyl-CoA Desaturase (SCD)
Isocitrate Dehydrogenase (IDH)
Aromatase
Bradykinin Receptor
Epoxide Hydrolase
Acetyl-CoA Carboxylase
Myosin
Arrestin
BACE
DNA Alkylation
Beta-Secretase
Ephrin Receptor
ABC Transporter
IRE1
PI4K
Survivin
Telomerase
Liposome
GTPase
GST
Monoamine Transporter
Cell Cycle Arrest
GPCR19
ATG
Monocarboxylate transporter
LDL
Free radical scavengers
Neurotensin Receptor
Phosphorylase
CaSR
MyD88
MicroRNA
Adenylate cyclase
Somatostatin
PKM
LDLR
CSF-1R
FOXO
NR4A
PROTAC Linker
PTEN
GPX
OAT
BCRP
MLK
IKZF
NAMPT
GHSR
Amylase
DNA gyrase
Discoidin Domain Receptor (DDR)
NADPH-oxidase
Gap Junction Protein
Melatonin Receptor
FKBP
Dynamin
UGT
GRK
Tie-2
Na+/Ca2+ Exchanger
CRFR
ADC Linker
Apelin receptor
Orphan Receptor
MNK
Imidazoline Receptor
Bcl-6
Arginase
Carboxypeptidase
Oxytocin Receptor
Protease
MIF
PYK2
GlyT
Wee1
ASK
DAPK
Bombesin Receptor
Neprilysin
ATP Citrate Lyase
Porcupine
p62
CGRP Receptor
Methionine Adenosyltransferase (MAT)
p97
OCT
RANKL/RANK
Annexin A
MT Receptor
SGK
Melanin-concentrating Hormone Receptor (MCHR)
SIK
FLAP
Vitamin
cGAS
Prolyl Endopeptidase (PREP)
Cadherin
LIM Kinase
CRM1
PAD
Aquaporin
CRISPR/Cas9
CAT
HCN Channel
TSH Receptor
Thrombopoietin Receptor
Arp2/3 Complex
Na-K-Cl cotransporter
PSMA
APC/C
MTP
REV-ERB
MRGPR
Galectin
CETP
TOPK
Neuropeptide FF Receptor
Adenosine Deaminase
ASCT
MELK
CD38
NEDD8
Hippo pathway
RAR/RXR
MALT
Haspin Kinase
HCAR
KLF
Cuproptosis
BMI-1
Taste receptor
NPC1L1
Succinate Receptor 1 (SUCNR1)
AAK1
Decarboxylase
FOXO3
VDAC
CD73
DprE1
FABP
MTH1
Hexokinase
ASBT
Hck
ACK1
Ferroportin
gp120/CD4
AIM2
CPT
Photosystem (PS)
Adiponectin Receptor
Huntingtin
PGK1
Advanced Glycation End Products
Cell wall
AAK1 (AP2 associated kinase 1)
EBI2/GPR183
GDNF
Factor VIIa
Endonuclease
PACAP
KSP
GluCls
NEDD4-1
Tight Junction Protein
Transaminase
Mucin
HuR
Kisspeptin
Glutathione reductase
Drug-Linker Conjugates for ADC
GSNOR
Y Box Binding Protein 1
GHR
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Transketolase
CD74
RXFP receptor
CYP19A1
Transmembrane Glycoprotein
Lysosomal Autophagy
Glutaminyl Cyclase
Urea Transporter
Glyoxalase
NUDIX hydrolase
Piezo Channel
Fas/FasL
Early 2 Factor (E2F)
hCE
TMV
Aconitase
Integrase
OLIG2
LHRH
MHC
Natriuretic peptide
stilbene oxidase
N-Acetylglucosaminyltransferase
Target Protein Ligand-Linker Conjugates
Anion Exchanger
FMO
Neuropeptide W
PGC-1α
Sulfotransferase
B7
Fer/FerT kinase
Enteropeptidase (EP)
Chemerin Receptor
ATTECs
MAP3K
Procollagen C Proteinase
Stemness kinase
Cholesterol synthesis
Poly(ADP-ribose) Glycohydrolase (PARG)
Motilin Receptor
Thioredoxin
Nuclear receptor
Sodium-dependent phosphate transporter
IGF-2R
NMU2R
NMUR

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