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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19650 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 10 μL x 10 mM (in DMSO)
  • 20 μL x 10 mM (in DMSO)
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19650 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
PI3K
Dopamine Receptor
CDK
Cytochromes P450
Akt
HIV Protease
Ras
Antioxidant
p38 MAPK
Caspase
Interleukin
TNF
Dehydrogenase
ERK
Sodium Channel
Histamine Receptor
EGFR
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Drug Metabolite
Influenza Virus
Cholinesterase (ChE)
mTOR
Microtubule Associated
Phosphatase
Wnt/beta-catenin
STAT
Histone Methyltransferase
TRP/TRPV Channel
GluR
SARS-CoV
Nucleoside Antimetabolite/Analog
Bcl-2 Family
Prostaglandin Receptor
Ferroptosis
HDAC
GPCR
JAK
Estrogen Receptor/ERR
MMP
PARP
Topoisomerase
AMPK
IL Receptor
Src
JNK
Mitochondrial Metabolism
PKC
Nrf2
TLR
Anti-infection
HCV Protease
Opioid Receptor
Antiviral
TGF-beta/Smad
Beta Amyloid
Estrogen/progestogen Receptor
Adenosine Receptor
GSK-3
FLT
RAAS
NMDAR
Androgen Receptor
PDGFR
Monoamine Oxidase
Glucocorticoid Receptor
Amino Acids and Derivatives
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
Tyrosinase
HSP
Proteasome
FGFR
MAPK
Lipoxygenase
HSV
Raf
Phospholipase
c-Met/HGFR
HBV
c-Kit
ATPase
MAO
Immunology/Inflammation related
Cannabinoid Receptor
ALK
Bcr-Abl
Sirtuin
PROTACs
Transferase
Serine Protease
P-gp
E1/E2/E3 Enzyme
Integrin
Reductase
PKA
DUB
Histone Demethylase
Kras
Glucosidase
NOD-like Receptor (NLR)
LPL Receptor
MEK
Antifection
Casein Kinase
Carbonic Anhydrase
Mitophagy
Serotonin Transporter
glycosidase
CCR
Aurora Kinase
IGF-1R
NOS
IκB/IKK
p53
PERK
Tyrosine Kinases
ROCK
Gamma-secretase
Angiotensin-converting Enzyme (ACE)
CXCR
Reverse Transcriptase
Serine/threonin kinase
Cysteine Protease
Retinoid Receptor
Neurokinin receptor
CaMK
Histone Acetyltransferase
HIF
FAK
Proton pump
RIP kinase
P2X Receptor
S1P Receptor
Norepinephrine
Acyltransferase
Fatty Acid Synthase
Sigma receptor
Leukotriene Receptor
Aryl Hydrocarbon Receptor
NOD
NADPH
Hedgehog/Smoothened
Trk receptor
Molecular Glues
transporter
c-RET
S6 Kinase
CFTR
Glutathione Peroxidase
Chloride channel
ATM/ATR
c-Fms
TAM Receptor
PD-1/PD-L1
DNA-PK
Ligands for E3 Ligase
DNA Alkylator/Crosslinker
Progesterone Receptor
Thrombin
Glucokinase
FAAH
Lipase
HMG-CoA Reductase
Kinesin
Syk
Thyroid hormone receptor(THR)
YAP
Chk
PLK
c-Myc
Smo
Xanthine Oxidase
DNA Methyltransferase
DPP-4
ROS Kinase
HER
DHFR
P2Y Receptor
Pim
FXR
DNA
Lipid
ribosome
Hydroxylase
IRAK
Cholecystokinin Receptor
Glucagon Receptor
STING
Complement System
Mdm2
Liver X Receptor
IDO
Indoleamine 2,3-Dioxygenase (IDO)
LTR
IFNAR
Antifolate
Melanocortin Receptor
PDK
Protease-activated Receptor
AhR
ADC Cytotoxin
DYRK
Rho
Endothelin Receptor
cAMP
OXPHOS
PGE Synthase
ROR
BTK
Necroptosis
Factor Xa
IAP
Neuropeptide Y Receptor
LPA Receptor
GNRH Receptor
Guanylate cyclase
OX Receptor
E3 Ligase Ligand-Linker Conjugates
Aminopeptidase
Pyroptosis
RSV
Platelet aggregation
MRP
MAGL
SGLT
LRRK2
Ligands for Target Protein for PROTAC
Photosensitizer
Glutaminase
PAK
Stearoyl-CoA Desaturase (SCD)
Vasopressin Receptor
PAI-1
Myosin
PAFR
Isocitrate Dehydrogenase (IDH)
DNA Alkylation
Epoxide Hydrolase
Acetyl-CoA Carboxylase
Aromatase
Arrestin
BACE
Bradykinin Receptor
Beta-Secretase
PI4K
IRE1
Monoamine Transporter
Survivin
Ephrin Receptor
Liposome
GTPase
Cell Cycle Arrest
ABC Transporter
Telomerase
GPCR19
GST
Monocarboxylate transporter
ATG
Neurotensin Receptor
LDL
Phosphorylase
Somatostatin
Free radical scavengers
MicroRNA
MyD88
CaSR
LDLR
CSF-1R
FOXO
PKM
NR4A
Adenylate cyclase
PTEN
BCRP
OAT
GPX
MLK
IKZF
NAMPT
Amylase
DNA gyrase
PROTAC Linker
GHSR
Discoidin Domain Receptor (DDR)
NADPH-oxidase
Dynamin
Tie-2
Melatonin Receptor
UGT
GRK
FKBP
Apelin receptor
Na+/Ca2+ Exchanger
Bcl-6
Orphan Receptor
MNK
CRFR
Gap Junction Protein
Imidazoline Receptor
ADC Linker
Arginase
MIF
PYK2
GlyT
Bombesin Receptor
Wee1
ASK
Neprilysin
Carboxypeptidase
Protease
DAPK
Melanin-concentrating Hormone Receptor (MCHR)
OCT
LIM Kinase
RANKL/RANK
Prolyl Endopeptidase (PREP)
SIK
Annexin A
FLAP
MT Receptor
ATP Citrate Lyase
Porcupine
Methionine Adenosyltransferase (MAT)
p62
CGRP Receptor
SGK
p97
Vitamin
CRM1
PAD
Cadherin
cGAS
CRISPR/Cas9
Oxytocin Receptor
Aquaporin
CAT
Arp2/3 Complex
HCN Channel
Thrombopoietin Receptor
PSMA
TSH Receptor
APC/C
MTP
CETP
TOPK
Galectin
AAK1
Neuropeptide FF Receptor
Na-K-Cl cotransporter
MRGPR
Adenosine Deaminase
REV-ERB
Taste receptor
NPC1L1
RAR/RXR
CD38
MALT
NEDD8
Succinate Receptor 1 (SUCNR1)
ASCT
Haspin Kinase
HCAR
Decarboxylase
MELK
Hippo pathway
KLF
Cuproptosis
BMI-1
FOXO3
ASBT
DprE1
VDAC
Hck
MTH1
FABP
Hexokinase
ACK1
CD73
Advanced Glycation End Products
Ferroportin
Cell wall
gp120/CD4
Kisspeptin
Photosystem (PS)
Adiponectin Receptor
AAK1 (AP2 associated kinase 1)
Huntingtin
AIM2
CPT
PGK1
Transaminase
GDNF
EBI2/GPR183
Factor VIIa
Endonuclease
PACAP
KSP
Mucin
Glutathione reductase
GluCls
HuR
NEDD4-1
Tight Junction Protein
Drug-Linker Conjugates for ADC
GSNOR
CYP19A1
NUDIX hydrolase
Piezo Channel
Y Box Binding Protein 1
Glutaminyl Cyclase
Aconitase
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Transmembrane Glycoprotein
Fas/FasL
Integrase
Transketolase
GHR
Early 2 Factor (E2F)
Urea Transporter
CD74
hCE
TMV
RXFP receptor
Lysosomal Autophagy
Glyoxalase
OLIG2
stilbene oxidase
Procollagen C Proteinase
Neuropeptide W
LHRH
N-Acetylglucosaminyltransferase
B7
Target Protein Ligand-Linker Conjugates
Stemness kinase
Motilin Receptor
Anion Exchanger
Thioredoxin
PGC-1α
FMO
Cholesterol synthesis
Sulfotransferase
Poly(ADP-ribose) Glycohydrolase (PARG)
MHC
Natriuretic peptide
ATTECs
Fer/FerT kinase
MAP3K
Nuclear receptor
Enteropeptidase (EP)
Chemerin Receptor
Sodium-dependent phosphate transporter
NMU2R
IGF-2R
NMUR

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