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TargetMol | Compound Library

Bioactive Compound Library

Catalog No. L4000

It contains more than 19650 small molecule compounds, with known biological activities causing biological reaction in cells, tissue even whole body, including Clinical compound library (L3400), Preclinical compound library (L3410), and Approved drug library (L1000). All compounds have clear targets and detailed information description, which is the key point to drug research and development like drug repurposing, small molecule inducing stem cell differentiation, and target identification in mechanism interrogation.

Many scientists have identified small molecules that can regulate cell fate and function, and stem cell differentiation by screening annotated bioactive compound library with confirmed activity and known targets. Recent advances in iPSC technology have made reprogramming of somatic cells towards pluripotency possible and simpler. Using both phenotypic screening and hypothesis-driven approaches, a growing number of compounds have been identified that can functionally replace reprogramming transcription factors, enhance efficiency of iPSC generation and accelerate the reprogramming process by single use or a combination of several molecules with success in cardiomyocyte differentiation and proliferation, neural progenitor cells, etc.

All products from TargetMol are for Research Use Only. Not for Human or Veterinary or Therapeutic Use.

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Catalog No. L4000

Bioactive Compound Library

sizeIn stock

  • 1 mg
  • 10 μL x 10 mM (in DMSO)
  • 20 μL x 10 mM (in DMSO)
  • 30 μL x 10 mM (in DMSO)
  • 50 μL x 10 mM (in DMSO)
  • 100 μL x 10 mM (in DMSO)
  • 250 μL x 10 mM (in DMSO)
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Packaging And Storage Packaging And Storage

  • Powder or pre-dissolved DMSO solutions in 96/384 well plate with optional 2D barcode
  • Shipped with blue ice
  • This compound library is provided at a concentration of 10 mM in DMSO. A small number of compounds may be provided in different solvents or concentrations due to solubility or stability requirements. Please refer to the specific product information for details.

Product Description Product Description

  • A collection of 19650 small molecule compounds with validated activity for high throughput screening (HTS), high content screening (HCS), cell induction, and target identification;
  • All compounds have clear targets;
  • An effective tool for discovering new with old drugs, cell induction, and new drug target screening;
  • Covers various disease research areas, such as Cancer, Metabolism, Immunology and Cardiovascular system, etc.
  • Detailed compound information with structure, target, activity, IC50 value, and brief introduction;
  • Structurally diverse, medicinally active, and cell permeable;
  • NMR and HPLC validated to ensure high purity and quality;

Advantages Introduction Advantages Introduction

High-Standard Entry Criteria

TargetMol's Bioactive Compounds Library is established upon rigorous entry standards to ensure that every compound included is structurally well-defined and of exceptional purity, verified through multiple analytical techniques such as NMR, HPLC, and LC-MS. Our multi-layered screening mechanism effectively eliminates compounds with ambiguous structures, such as mixtures and polymers. Moreover, we specifically exclude substances like sunscreens, contrast agents, dyes, fragrances, plastic additives, and intermediates—compounds typically lacking biological activity due to their specificity and stability, which generally prevent interactions with biological systems. This meticulous curation reduces time and resource waste caused by ineffective screenings.

Significant Structural Diversity

TargetMol’s Bioactive Compounds Library features extensive scaffold diversity and structural complexity, offering a substantial advantage in drug discovery. Based on the Bemis-Murcko scaffold classification, our library is categorized into 10,102 unique classes, each representing a distinct molecular scaffold, thereby extensively covering a broad chemical space. The compounds range from simple to highly complex structures, providing a diverse foundation for identifying lead compounds with strong affinity and specificity toward target proteins. This structural richness significantly advances pharmaceutical innovation. Whether targeting traditional drug targets or emerging, more challenging ones, our Bioactive Compounds Library offers a wealth of candidate molecules to accelerate the drug development process.

 Bioactive Compound Library
Library Diversity Analysis

Superior Drug-Like Properties

67% of the compounds in TargetMol's Bioactive Compounds Library comply with Lipinski’s "Rule of Five" (Ro5), indicating excellent bioavailability and permeability.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Multidimensional Pharmacokinetic Analysis

A multidimensional evaluation is conducted on TargetMol’s Bioactive Compounds Library, which systematically analyzes three key pharmacological parameters: blood-brain barrier permeability, cardiotoxicity (HERG K+ channel inhibition), and oral absorption performance.

 Bioactive Compound Library  Bioactive Compound Library  Bioactive Compound Library

14% of the compounds can cross the blood-brain barrier, while 86% cannot.
49% of the compounds exhibit cardiotoxicity, while 51% do not.
54% of the compounds are highly orally absorbable.

Diverse Compound Collection

TargetMol's Bioactive Compound Library covers a wide variety of compounds with diverse biological activities. This includes marketed drugs, drug candidates in clinical trials, and compounds with reported biological activities in the literature. The library encompasses not only mainstream signaling pathways and targets but also numerous emerging therapeutic targets. It spans various therapeutic areas, including cancer, cardiovascular diseases, and neurological disorders.

 Bioactive Compound Library  Bioactive Compound Library
 Bioactive Compound Library  Bioactive Compound Library

Regular Updates to Compound Libraries

We ensure our compound libraries remain at the forefront of scientific research by regularly updating our database with compounds mentioned in cutting-edge literature and newly custom-synthesized compounds.

Flexible Packaging Options

We offer a variety of standard packaging sizes (e.g., 30 μL, 50 μL, 100 μL, 250 μL, 1 mg), and we can customize packaging solutions to meet specific needs.

Customized Services

To support specific needs, we offer tailored screening services, including the design and synthesis of customized compound libraries and the execution of personalized screening projects. Our highly flexible service model is designed to efficiently meet unique needs of scientists and accelerate breakthrough discoveries.

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Apoptosis
Antibacterial
Endogenous Metabolite
Autophagy
Antibiotic
ROS
Parasite
NF-κB
5-HT Receptor
DNA/RNA Synthesis
Antifungal
AChR
Adrenergic Receptor
COX
Calcium Channel
Reactive Oxygen Species
Potassium Channel
PI3K
Dopamine Receptor
CDK
Cytochromes P450
Akt
HIV Protease
Ras
p38 MAPK
Antioxidant
Interleukin
Caspase
TNF
Dehydrogenase
ERK
Sodium Channel
Histamine Receptor
EGFR
GABA Receptor
PDE
Epigenetic Reader Domain
VEGFR
NO Synthase
PPAR
Virus Protease
iGluR
Drug Metabolite
Cholinesterase (ChE)
Influenza Virus
mTOR
Wnt/beta-catenin
Microtubule Associated
Phosphatase
Histone Methyltransferase
STAT
GluR
SARS-CoV
Nucleoside Antimetabolite/Analog
TRP/TRPV Channel
Bcl-2 Family
Prostaglandin Receptor
HDAC
Ferroptosis
JAK
GPCR
Estrogen Receptor/ERR
MMP
PARP
Topoisomerase
AMPK
IL Receptor
Src
JNK
Mitochondrial Metabolism
Nrf2
PKC
TLR
Beta Amyloid
Anti-infection
HCV Protease
Antiviral
Adenosine Receptor
GSK-3
TGF-beta/Smad
Opioid Receptor
FLT
Estrogen/progestogen Receptor
RAAS
NMDAR
PDGFR
Androgen Receptor
Monoamine Oxidase
Glucocorticoid Receptor
Amino Acids and Derivatives
MDM-2/p53
HIF/HIF Prolyl-Hydroxylase
Tyrosinase
HSP
Proteasome
FGFR
MAPK
Lipoxygenase
HSV
Phospholipase
Raf
c-Met/HGFR
HBV
c-Kit
MAO
Immunology/Inflammation related
ALK
ATPase
Cannabinoid Receptor
Bcr-Abl
PROTACs
E1/E2/E3 Enzyme
Sirtuin
Serine Protease
P-gp
Transferase
Integrin
Reductase
PKA
Histone Demethylase
DUB
Kras
NOD-like Receptor (NLR)
Glucosidase
LPL Receptor
MEK
Casein Kinase
Antifection
Carbonic Anhydrase
Serotonin Transporter
CCR
glycosidase
Mitophagy
Aurora Kinase
IGF-1R
NOS
p53
IκB/IKK
PERK
ROCK
Reverse Transcriptase
Tyrosine Kinases
Gamma-secretase
Angiotensin-converting Enzyme (ACE)
CXCR
Serine/threonin kinase
Cysteine Protease
HIF
Retinoid Receptor
Neurokinin receptor
Histone Acetyltransferase
CaMK
P2X Receptor
S1P Receptor
Proton pump
Norepinephrine
FAK
RIP kinase
NOD
Sigma receptor
Acyltransferase
Leukotriene Receptor
Aryl Hydrocarbon Receptor
Fatty Acid Synthase
NADPH
Hedgehog/Smoothened
Trk receptor
CFTR
Molecular Glues
transporter
S6 Kinase
c-RET
Chloride channel
Glutathione Peroxidase
ATM/ATR
c-Fms
PD-1/PD-L1
TAM Receptor
DNA-PK
Ligands for E3 Ligase
Progesterone Receptor
FAAH
Glucokinase
Thrombin
Lipase
DNA Alkylator/Crosslinker
HMG-CoA Reductase
Kinesin
Chk
PLK
Syk
YAP
c-Myc
Xanthine Oxidase
DNA Methyltransferase
Thyroid hormone receptor(THR)
Smo
ROS Kinase
HER
DNA
P2Y Receptor
DPP-4
IRAK
ribosome
Hydroxylase
FXR
Pim
Lipid
DHFR
Mdm2
Liver X Receptor
Glucagon Receptor
Complement System
STING
Cholecystokinin Receptor
IDO
PDK
Indoleamine 2,3-Dioxygenase (IDO)
cAMP
LTR
IFNAR
AhR
Antifolate
Protease-activated Receptor
ADC Cytotoxin
DYRK
Rho
Melanocortin Receptor
OXPHOS
Endothelin Receptor
PGE Synthase
ROR
BTK
Factor Xa
IAP
Necroptosis
Neuropeptide Y Receptor
LPA Receptor
GNRH Receptor
Platelet aggregation
E3 Ligase Ligand-Linker Conjugates
RSV
Guanylate cyclase
Pyroptosis
OX Receptor
Aminopeptidase
MAGL
LRRK2
SGLT
MRP
Photosensitizer
PAK
Vasopressin Receptor
PAI-1
Ligands for Target Protein for PROTAC
Stearoyl-CoA Desaturase (SCD)
Glutaminase
Isocitrate Dehydrogenase (IDH)
Aromatase
PAFR
Bradykinin Receptor
Epoxide Hydrolase
Acetyl-CoA Carboxylase
Myosin
PI4K
Arrestin
BACE
DNA Alkylation
Beta-Secretase
Ephrin Receptor
ABC Transporter
Monoamine Transporter
IRE1
Telomerase
Liposome
Survivin
GTPase
GST
Cell Cycle Arrest
GPCR19
ATG
Monocarboxylate transporter
LDL
Free radical scavengers
Phosphorylase
Neurotensin Receptor
CaSR
MicroRNA
MyD88
PKM
LDLR
CSF-1R
FOXO
Adenylate cyclase
Somatostatin
NR4A
OAT
PTEN
GPX
MLK
BCRP
IKZF
NAMPT
GHSR
PROTAC Linker
Amylase
DNA gyrase
NADPH-oxidase
Discoidin Domain Receptor (DDR)
Gap Junction Protein
Dynamin
Melatonin Receptor
FKBP
GRK
Tie-2
UGT
Na+/Ca2+ Exchanger
CRFR
Apelin receptor
Orphan Receptor
MNK
Imidazoline Receptor
Bcl-6
ADC Linker
Arginase
Carboxypeptidase
Protease
Bombesin Receptor
Neprilysin
MIF
PYK2
GlyT
Wee1
ASK
DAPK
ATP Citrate Lyase
Porcupine
p62
LIM Kinase
Prolyl Endopeptidase (PREP)
CGRP Receptor
OCT
RANKL/RANK
Annexin A
MT Receptor
SGK
SIK
FLAP
Methionine Adenosyltransferase (MAT)
p97
Vitamin
Oxytocin Receptor
cGAS
CRISPR/Cas9
Cadherin
Melanin-concentrating Hormone Receptor (MCHR)
CRM1
PAD
Aquaporin
CAT
HCN Channel
TSH Receptor
Arp2/3 Complex
PSMA
APC/C
Thrombopoietin Receptor
MTP
REV-ERB
Galectin
MRGPR
CETP
Na-K-Cl cotransporter
TOPK
AAK1
Neuropeptide FF Receptor
Adenosine Deaminase
ASCT
MELK
CD38
NEDD8
Hippo pathway
Haspin Kinase
HCAR
KLF
RAR/RXR
MALT
BMI-1
Taste receptor
NPC1L1
Succinate Receptor 1 (SUCNR1)
Decarboxylase
Cuproptosis
FOXO3
VDAC
CD73
MTH1
Hexokinase
DprE1
FABP
Hck
ACK1
ASBT
Ferroportin
gp120/CD4
AIM2
CPT
Photosystem (PS)
Adiponectin Receptor
Huntingtin
Advanced Glycation End Products
Cell wall
AAK1 (AP2 associated kinase 1)
PGK1
EBI2/GPR183
GDNF
Factor VIIa
Endonuclease
NEDD4-1
Tight Junction Protein
PACAP
KSP
GluCls
HuR
Kisspeptin
Glutathione reductase
Transaminase
Mucin
Drug-Linker Conjugates for ADC
GSNOR
Y Box Binding Protein 1
GHR
VDA
LAG-3
PARG(Poly(ADP-ribose) Glycohydrolase)
Transketolase
CD74
CYP19A1
Transmembrane Glycoprotein
Lysosomal Autophagy
RXFP receptor
Glyoxalase
NUDIX hydrolase
Piezo Channel
Fas/FasL
Early 2 Factor (E2F)
hCE
TMV
Aconitase
Integrase
Glutaminyl Cyclase
Urea Transporter
OLIG2
LHRH
MHC
Natriuretic peptide
stilbene oxidase
N-Acetylglucosaminyltransferase
Target Protein Ligand-Linker Conjugates
Anion Exchanger
FMO
B7
Fer/FerT kinase
Enteropeptidase (EP)
Neuropeptide W
PGC-1α
Sulfotransferase
ATTECs
MAP3K
Procollagen C Proteinase
Stemness kinase
Cholesterol synthesis
Poly(ADP-ribose) Glycohydrolase (PARG)
Motilin Receptor
Thioredoxin
Nuclear receptor
Chemerin Receptor
IGF-2R
Sodium-dependent phosphate transporter
NMU2R
NMUR

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