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DAPI Dihydrochloride

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Catalog No. T19827Cas No. 28718-90-3
Alias 4',6-diamidino-2-phenylindole

DAPI Dihydrochloride is a cell-permeable fluorescent probe. By binding to small forests rich in A-T DNA sequences, it is used to stain DNA and chromosomes, with a preference for DNA rich in adenine and thymine.

DAPI Dihydrochloride

DAPI Dihydrochloride

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Purity: 99.94%
Catalog No. T19827Alias 4',6-diamidino-2-phenylindoleCas No. 28718-90-3
DAPI Dihydrochloride is a cell-permeable fluorescent probe. By binding to small forests rich in A-T DNA sequences, it is used to stain DNA and chromosomes, with a preference for DNA rich in adenine and thymine.
Pack SizePriceUSA WarehouseGlobal WarehouseQuantity
5 mg$35In StockIn Stock
10 mg$62In StockIn Stock
25 mg$133In StockIn Stock
50 mg$213In StockIn Stock
100 mg$318In StockIn Stock
200 mg$473-In Stock
1 mL x 10 mM (in DMSO)$39In StockIn Stock
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In Stock Estimated shipping dateUSA Warehouse[1-2 days] Global Warehouse[5-7 days]
All TargetMol products are for research purposes only and cannot be used for human consumption. We do not provide products or services to individuals. Please comply with the intended use and do not use TargetMol products for any other purpose.
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Purity:99.94%
Color:White to Yellow
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Product Introduction

DAPI Dihydrochloride AI Summary
DAPI Dihydrochloride has exhibited DNA binding activity, demonstrated by an increase in fluorescence intensity when in the presence of calf thymus DNA at various molar ratios. The enhancement in fluorescence indicates stronger DNA interaction, with higher ratios resulting in greater enhancement. This suggests that DAPI Dihydrochloride may possess potential bioactivity related to DNA binding or interactions..
Note: Summary generated by AI. Data source: ChEMBL
Bioactivity
Description
DAPI Dihydrochloride is a cell-permeable fluorescent probe. By binding to small forests rich in A-T DNA sequences, it is used to stain DNA and chromosomes, with a preference for DNA rich in adenine and thymine.
In vitro
DAPI dihydrochloride staining (adherent cells)

I. Preparation of working solution:

Dissolve 1 mg DAPI dihydrochloride in 1 mL ddH2O/DMSO to obtain a 1 mg/mL stock solution.

Use for adherent cells: For example, HeLa cells:

Material preparation:

PBS (phosphate buffered saline): used for cell washing and diluting DAPI dihydrochloride.

Fixative solution: 4% paraformaldehyde (PFA) or glacial acetic acid fixative is commonly used.

Sealants: For example, anti-fluorescence decay agents, help protect samples from light.

Fluorescence microscope: used to observe staining results.

II. Experimental steps

1. Cell fixation

Culturing cells:
Cultivate adherent cells on sterile coverslips (usually to 70-80% confluence).
Fixed cells:

1) Aspirate the culture medium in the culture dish and wash the cells 1-2 times with PBS to remove the residual culture medium.
2) Add 4% PFA fixative and fix the cells at room temperature for 10-30 minutes (depending on the cell type).
3) After fixation, wash the cells 3 times with PBS buffer for 5 minutes each time to remove excess fixative.

2. DAPI staining

Prepare DAPI working solution:
DAPI is diluted in ddH2O/DMSO, usually at a concentration of 1-10 µg/mL.

Staining:
Add DAPI working solution (100 μL) to the fixed cells for 10-30 minutes, which can be adjusted according to the cell type and experimental requirements.

3. Washing

Gently wash the cells 3 times with PBS buffer for 5 minutes each time to remove unbound DAPI dihydrochloride.

4. Sealing

Prepare the sample:
Add an appropriate amount of PBS or anti-fluorescence decay agent sealing solution and gently cover the coverslip.

Fixation:
Seal the edges of the coverslip with transparent tape or sealing agent to prevent drying.

5. Microscopic observation

Use a fluorescence microscope to observe the staining results at a specific wavelength. The cell nucleus will show bright blue fluorescence.

III. Precautions

1. Avoid light: DAPI dihydrochloride is light-sensitive and should be avoided from long-term exposure to light to prevent dye photodegradation.

2. Fixation time: The fixation time and conditions of different adherent cells may vary and need to be optimized according to the specific cell type.

3. Self-control: It is recommended to set up a negative control (unstained cells) to confirm the specificity and effectiveness of the staining.

4. Cell status: Ensure that the cells grow healthily before fixation to avoid dead cells affecting the staining results.

5. Please adjust the concentration of DAPI dihydrochloride working solution according to the actual situation.

6. This product is for scientific research only and is not for drug, home or other purposes.

7.For your safety and health, please wear a white coat and disposable gloves when operating.

The above information is based on published literature. Experimental procedures should be appropriately modified to meet specific research demands.
Synonyms4',6-diamidino-2-phenylindole
Chemical Properties
Molecular Weight350.24
FormulaC16H17Cl2N5
Cas No.28718-90-3
SmilesCl.Cl.NC(=N)C1=CC=C(C=C1)C1=CC2=CC=C(C=C2N1)C(N)=N
Relative Density.1.41g/cm3
Storage & Solubility Information
Storagekeep away from direct sunlight,store at low temperature | Powder: -20°C for 3 years | In solvent: -80°C for 1 year | Shipping with blue ice/Shipping at ambient temperature.
Solubility Information
H2O: 5 mg/mL (14.28 mM), Sonication is recommended.
DMSO: 247.5 mg/mL (706.66 mM), Sonication is recommended.
In Vivo Formulation
10% DMSO+40% PEG300+5% Tween-80+45% Saline: 3.3 mg/mL (9.42 mM), Sonication is recommended.
Please add the solvents sequentially, clarifying the solution as much as possible before adding the next one. Dissolve by heating and/or sonication if necessary. Working solution is recommended to be prepared and used immediately. The formulation provided above is for reference purposes only. In vivo formulations may vary and should be modified based on specific experimental conditions.
Solution Preparation Table
H2O/DMSO
1mg5mg10mg50mg
1 mM2.8552 mL14.2759 mL28.5519 mL142.7593 mL
5 mM0.5710 mL2.8552 mL5.7104 mL28.5519 mL
10 mM0.2855 mL1.4276 mL2.8552 mL14.2759 mL
DMSO
1mg5mg10mg50mg
20 mM0.1428 mL0.7138 mL1.4276 mL7.1380 mL
50 mM0.0571 mL0.2855 mL0.5710 mL2.8552 mL
100 mM0.0286 mL0.1428 mL0.2855 mL1.4276 mL

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In Vivo Formulation Calculator (Clear solution)

Please enter your animal experiment information in the following box and click Calculate to obtain the stock solution preparation method and in vivo formula preparation method:
TargetMol | Animal experiments For example, if the intended dosage is 10 mg/kg for animals weighing 20 g , with a dosing volume of 100 μL per animal, TargetMol | Animal experiments and a total of 10 animals are to be administered, using a formulation of TargetMol | reagent 10% DMSO+ 40% PEG300+ 5% Tween 80+ 45% Saline/PBS/ddH2O , the resulting working solution concentration would be 2 mg/mL.
Stock Solution Preparation:

Dissolve 2 mg of the compound in 100 μL DMSOTargetMol | reagent to obtain a stock solution at a concentration of 20 mg/mL . If the required concentration exceeds the compound's known solubility, please contact us for technical support before proceeding.

Preparation of the In Vivo Formulation:

1) Add 100 μL of the DMSOTargetMol | reagent stock solution to 400 μL PEG300TargetMol | reagent and mix thoroughly until the solution becomes clear.

2) Add 50 μL Tween 80 and mix well until fully clarified.

3) Add 450 μL Saline,PBS or ddH2OTargetMol | reagent and mix thoroughly until a homogeneous solution is obtained.

This example is provided solely to demonstrate the use of the In Vivo Formulation Calculator and does not constitute a recommended formulation for any specific compound. Please select an appropriate dissolution and formulation strategy based on your experimental model and route of administration.
All co-solvents required for this protocol, includingDMSO, PEG300/PEG400, Tween 80, SBE-β-CD, and Corn oil, are available for purchase on the TargetMol website.
1 Enter information below:
mg/kg
g
μL
2 Enter the in vivo formulation:
% DMSO
%
% Tween 80
% Saline/PBS/ddH2O

Dose Conversion

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Tech Support

Please see Inhibitor Handling Instructions for more frequently ask questions. Topics include: how to prepare stock solutions, how to store products, and cautions on cell-based assays & animal experiments, etc

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